RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 SPEF2Q9C093 1822 aa18.21■□□□□ 0.51
NEAT1-203ENST00000601801 LINS1Q8NG48 757 aa18.2■□□□□ 0.5
NEAT1-203ENST00000601801 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
NEAT1-203ENST00000601801 FAM9BQ8IZU0 186 aa18.19■□□□□ 0.5
NEAT1-203ENST00000601801 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
NEAT1-203ENST00000601801 GBA2Q9HCG7 927 aaPredicted RBP18.19■□□□□ 0.5
NEAT1-203ENST00000601801 MINPP1Q9UNW1 487 aa18.19■□□□□ 0.5
NEAT1-203ENST00000601801 EGFRP00533 1210 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
NEAT1-203ENST00000601801 SOX10P56693 466 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 KIF23Q02241 960 aaPredicted RBP18.18■□□□□ 0.5
NEAT1-203ENST00000601801 KIF4BQ2VIQ3 1234 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 RSBN1LQ6PCB5 846 aaPredicted RBP18.18■□□□□ 0.5
NEAT1-203ENST00000601801 PODNQ7Z5L7 613 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 C2orf69Q8N8R5 385 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 AGBL3Q8NEM8 1001 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 CCDC102AQ96A19 550 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 PSME4Q14997 1843 aa18.18■□□□□ 0.5
NEAT1-203ENST00000601801 NEFLP07196 543 aa18.17■□□□□ 0.5
NEAT1-203ENST00000601801 CCT4P50991 539 aaKnown RBP18.17■□□□□ 0.5
NEAT1-203ENST00000601801 RNF186Q9NXI6 227 aa18.17■□□□□ 0.5
NEAT1-203ENST00000601801 MED23Q9ULK4 1368 aa18.17■□□□□ 0.5
NEAT1-203ENST00000601801 ZNF609O15014 1411 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 USP17L3A6NCW0 530 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 USP17L4A6NCW7 530 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 TRPA1O75762 1119 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 ITGA6P23229 1130 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 CASP7P55210 303 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 USP17L1Q7RTZ2 530 aa18.16■□□□□ 0.5
NEAT1-203ENST00000601801 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
NEAT1-203ENST00000601801 ZNF157P51786 506 aaPredicted RBP18.15■□□□□ 0.5
NEAT1-203ENST00000601801 ZNF280AP59817 542 aaPredicted RBP18.15■□□□□ 0.5
NEAT1-203ENST00000601801 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.51e-323■□□□□ 8.8
NEAT1-203ENST00000601801 SULF1Q8IWU6 871 aa18.15■□□□□ 0.5
NEAT1-203ENST00000601801 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
NEAT1-203ENST00000601801 ANKRD2Q9GZV1 360 aa18.15■□□□□ 0.5
NEAT1-203ENST00000601801 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
NEAT1-203ENST00000601801 WTIPA6NIX2 430 aaPredicted RBP18.14■□□□□ 0.49
NEAT1-203ENST00000601801 CSF1RP07333 972 aa18.14■□□□□ 0.49
NEAT1-203ENST00000601801 SLC10A3P09131 477 aa18.14■□□□□ 0.49
NEAT1-203ENST00000601801 USP17L8P0C7I0 530 aa18.14■□□□□ 0.49
NEAT1-203ENST00000601801 GGA3Q9NZ52 723 aa18.14■□□□□ 0.49
NEAT1-203ENST00000601801 LEMD3Q9Y2U8 911 aa18.14■□□□□ 0.49
NEAT1-203ENST00000601801 F6X3S4 739 aa18.13■□□□□ 0.49
NEAT1-203ENST00000601801 CSRNP1Q96S65 589 aa18.13■□□□□ 0.49
NEAT1-203ENST00000601801 GMLQ99445 158 aa18.13■□□□□ 0.49
NEAT1-203ENST00000601801 ANKRD18BA2A2Z9 1011 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 SCARF1Q14162 830 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 PRPF38BQ5VTL8 546 aaKnown RBP18.12■□□□□ 0.49
NEAT1-203ENST00000601801 CTU1Q7Z7A3 348 aaKnown RBP18.12■□□□□ 0.49
NEAT1-203ENST00000601801 COA1Q9GZY4 146 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 MYOZ2Q9NPC6 264 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 ZNF804BA4D1E1 1349 aa18.12■□□□□ 0.49
NEAT1-203ENST00000601801 KCNJ4P48050 445 aa18.11■□□□□ 0.49
NEAT1-203ENST00000601801 ANGEL2Q5VTE6 544 aaKnown RBP18.11■□□□□ 0.49
NEAT1-203ENST00000601801 FBXW7Q969H0 707 aa18.11■□□□□ 0.49
NEAT1-203ENST00000601801 ASTN2O75129 1339 aaPredicted RBP18.11■□□□□ 0.49
NEAT1-203ENST00000601801 MYO3BQ8WXR4 1341 aa18.1■□□□□ 0.49
NEAT1-203ENST00000601801 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
NEAT1-203ENST00000601801 STRIP1Q5VSL9 837 aa18.1■□□□□ 0.49
NEAT1-203ENST00000601801 TXNRD3Q86VQ6 643 aa18.1■□□□□ 0.49
NEAT1-203ENST00000601801 REM2Q8IYK8 340 aaPredicted RBP18.1■□□□□ 0.49
NEAT1-203ENST00000601801 OGFOD1Q8N543 542 aa18.1■□□□□ 0.49
NEAT1-203ENST00000601801 CHMP3Q9Y3E7 222 aa18.1■□□□□ 0.49
NEAT1-203ENST00000601801 FOXO4P98177 505 aa18.09■□□□□ 0.49
NEAT1-203ENST00000601801 CHRNDQ07001 517 aa18.09■□□□□ 0.49
NEAT1-203ENST00000601801 DACT2Q5SW24 774 aa18.09■□□□□ 0.49
NEAT1-203ENST00000601801 CDCA5Q96FF9 252 aa18.09■□□□□ 0.49
NEAT1-203ENST00000601801 PAPPA2Q9BXP8 1791 aa18.09■□□□□ 0.49
NEAT1-203ENST00000601801 ZBED9Q6R2W3 1325 aa18.08■□□□□ 0.49
NEAT1-203ENST00000601801 PITPNM2Q9BZ72 1349 aa18.08■□□□□ 0.49
NEAT1-203ENST00000601801 GRM8O00222 908 aa18.08■□□□□ 0.48
NEAT1-203ENST00000601801 RASAL3Q86YV0 1011 aa18.08■□□□□ 0.48
NEAT1-203ENST00000601801 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
NEAT1-203ENST00000601801 ALDH1L1O75891 902 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 KLRK1P26718 216 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 MMP14P50281 582 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 SLC4A10Q6U841 1118 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 LMBR1LQ6UX01 489 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 MXD3Q9BW11 206 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 HPS5Q9UPZ3 1129 aa18.07■□□□□ 0.48
NEAT1-203ENST00000601801 SUPT16HQ9Y5B9 1047 aaKnown RBP18.07■□□□□ 0.48
NEAT1-203ENST00000601801 ZNF646O15015 1829 aaPredicted RBP18.07■□□□□ 0.48
NEAT1-203ENST00000601801 ZNF521Q96K83 1311 aa18.06■□□□□ 0.48
NEAT1-203ENST00000601801 CCDC57Q2TAC2 916 aa18.06■□□□□ 0.48
NEAT1-203ENST00000601801 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
NEAT1-203ENST00000601801 TAF5LO75529 589 aa18.05■□□□□ 0.48
NEAT1-203ENST00000601801 FKBP1BP68106 108 aa18.05■□□□□ 0.48
NEAT1-203ENST00000601801 PKN2Q16513 984 aaKnown RBP18.05■□□□□ 0.48
NEAT1-203ENST00000601801 NBPF9Q3BBW0 867 aa18.05■□□□□ 0.48
NEAT1-203ENST00000601801 TAF7LQ5H9L4 462 aa18.05■□□□□ 0.48
NEAT1-203ENST00000601801 HDAC9Q9UKV0 1011 aa18.05■□□□□ 0.48
NEAT1-203ENST00000601801 GTF2IP78347 998 aa18.04■□□□□ 0.48
NEAT1-203ENST00000601801 EPHA10Q5JZY3 1008 aa18.04■□□□□ 0.48
NEAT1-203ENST00000601801 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
NEAT1-203ENST00000601801 CD209Q9NNX6 404 aa18.04■□□□□ 0.48
NEAT1-203ENST00000601801 WNT10BO00744 389 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms