RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CIAPIN1Q6FI81 312 aa24.42■■□□□ 1.5
SHKBP1-214ENST00000597396 ATG9AQ7Z3C6 839 aa24.42■■□□□ 1.5
SHKBP1-214ENST00000597396 GPC2Q8N158 579 aa24.42■■□□□ 1.5
SHKBP1-214ENST00000597396 RAD17O75943 681 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 PDE8BO95263 885 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 KLRK1P26718 216 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 IL15P40933 162 aaPredicted RBP24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 CXCL9Q07325 125 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 CEP85Q6P2H3 762 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 TXNRD3Q86VQ6 643 aa24.41■■□□□ 1.5
SHKBP1-214ENST00000597396 POLA2Q14181 598 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 TNIP1Q15025 636 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 VGLL2Q8N8G2 317 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 SSH3Q8TE77 659 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 COA1Q9GZY4 146 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 CEP126Q9P2H0 1117 aa24.4■■□□□ 1.5
SHKBP1-214ENST00000597396 G3BP1Q13283 466 aaKnown RBP eCLIP24.39■■□□□ 1.49
SHKBP1-214ENST00000597396 C15orf52Q6ZUT6 534 aaKnown RBP24.39■■□□□ 1.49
SHKBP1-214ENST00000597396 MYH13Q9UKX3 1938 aa24.38■■□□□ 1.49
SHKBP1-214ENST00000597396 PUM3Q15397 648 aaKnown RBP24.38■■□□□ 1.49
SHKBP1-214ENST00000597396 ZNF804AQ7Z570 1209 aa24.38■■□□□ 1.49
SHKBP1-214ENST00000597396 PODNQ7Z5L7 613 aa24.38■■□□□ 1.49
SHKBP1-214ENST00000597396 VEGFAP15692 232 aaPredicted RBP24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 RPAP2Q8IXW5 612 aaPredicted RBP24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 DNAJC5GQ8N7S2 189 aa24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 SMC1BQ8NDV3 1235 aa24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 L3MBTL3Q96JM7 780 aaPredicted RBP24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
SHKBP1-214ENST00000597396 IRS2Q9Y4H2 1338 aa24.36■■□□□ 1.49
SHKBP1-214ENST00000597396 PSMD14O00487 310 aa24.36■■□□□ 1.49
SHKBP1-214ENST00000597396 IFIT1P09914 478 aaKnown RBP24.36■■□□□ 1.49
SHKBP1-214ENST00000597396 OS9Q13438 667 aaPredicted RBP24.36■■□□□ 1.49
SHKBP1-214ENST00000597396 KCNQ5Q9NR82 932 aa24.36■■□□□ 1.49
SHKBP1-214ENST00000597396 ARAP2Q8WZ64 1704 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 IQCA1LA6NCM1 817 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 HMMRO75330 724 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 SURF6O75683 361 aaKnown RBP24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 SLC5A1P13866 664 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 LMOD1P29536 600 aaPredicted RBP24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 HTRA3P83110 453 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 FBXW7Q969H0 707 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 CRBNQ96SW2 442 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 CD209Q9NNX6 404 aa24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 ZNF646O15015 1829 aaPredicted RBP24.35■■□□□ 1.49
SHKBP1-214ENST00000597396 ATP2B3Q16720 1220 aa24.34■■□□□ 1.49
SHKBP1-214ENST00000597396 LPIN2Q92539 896 aa24.34■■□□□ 1.49
SHKBP1-214ENST00000597396 USP17L3A6NCW0 530 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 USP17L4A6NCW7 530 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 POTECB2RU33 542 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 FGFR2P21802 821 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 HIBADHP31937 336 aaKnown RBP24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 GYG1P46976 350 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 GMPSP49915 693 aaPredicted RBP24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 TFCP2Q12800 502 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 CAVIN4Q5BKX8 364 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 USP17L1Q7RTZ2 530 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 VPS37DQ86XT2 251 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 HACL1Q9UJ83 578 aa24.33■■□□□ 1.49
SHKBP1-214ENST00000597396 IFFO2Q5TF58 517 aa24.32■■□□□ 1.48
SHKBP1-214ENST00000597396 FAM84BQ96KN1 310 aaPredicted RBP24.32■■□□□ 1.48
SHKBP1-214ENST00000597396 AKAP2Q9Y2D5 859 aa24.32■■□□□ 1.48
SHKBP1-214ENST00000597396 VIL1P09327 827 aaKnown RBP24.31■■□□□ 1.48
SHKBP1-214ENST00000597396 SCNN1DP51172 638 aa24.31■■□□□ 1.48
SHKBP1-214ENST00000597396 NOP58Q9Y2X3 529 aaKnown RBP24.31■■□□□ 1.48
SHKBP1-214ENST00000597396 ZBTB12Q9Y330 459 aaPredicted RBP24.31■■□□□ 1.48
SHKBP1-214ENST00000597396 IL1R1P14778 569 aa24.3■■□□□ 1.48
SHKBP1-214ENST00000597396 RPS12P25398 132 aaKnown RBP24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 GTF2IP78347 998 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 STRIP1Q5VSL9 837 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 TTLL5Q6EMB2 1281 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 RSBN1LQ6PCB5 846 aaPredicted RBP24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 FBXO33Q7Z6M2 555 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 SIRT2Q8IXJ6 389 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 KLRG1Q96E93 195 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 TAF1DQ9H5J8 278 aaPredicted RBP24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 GPRC5DQ9NZD1 345 aa24.29■■□□□ 1.48
SHKBP1-214ENST00000597396 SASH1O94885 1247 aa24.28■■□□□ 1.48
SHKBP1-214ENST00000597396 EPHX2P34913 555 aa24.28■■□□□ 1.48
SHKBP1-214ENST00000597396 EXOC6BQ9Y2D4 811 aa24.28■■□□□ 1.48
SHKBP1-214ENST00000597396 A0A1B0GUL7 405 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 FRAT2O75474 233 aaPredicted RBP24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 EPS15P42566 896 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 BCAMP50895 628 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 HSP90AB4PQ58FF6 505 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 TDRD7Q8NHU6 1098 aaKnown RBP24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 DPF2Q92785 391 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 ZNF609O15014 1411 aa24.27■■□□□ 1.48
SHKBP1-214ENST00000597396 H7C1D1 291 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 TIMM10P62072 90 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 EAPPQ56P03 285 aaPredicted RBP24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 DACT2Q5SW24 774 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 ERC1Q8IUD2 1116 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 AGBL3Q8NEM8 1001 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 NEUROD6Q96NK8 337 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 CNOT7Q9UIV1 285 aaKnown RBP24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 IQSEC3Q9UPP2 1182 aaPredicted RBP24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 MYO3BQ8WXR4 1341 aa24.26■■□□□ 1.47
SHKBP1-214ENST00000597396 MICALL2Q8IY33 904 aa24.25■■□□□ 1.47
SHKBP1-214ENST00000597396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.25■■□□□ 1.47
SHKBP1-214ENST00000597396 ADORA1P30542 326 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms