RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 TBC1D10BQ4KMP7 808 aaPredicted RBP13.26□□□□□ -0.29
CCDC9-203ENST00000596938 TAF7LQ5H9L4 462 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 STRIP1Q5VSL9 837 aa13.26□□□□□ -0.29
CCDC9-203ENST00000596938 TAF5LO75529 589 aa13.25□□□□□ -0.29
CCDC9-203ENST00000596938 EGFRP00533 1210 aa13.25□□□□□ -0.29
CCDC9-203ENST00000596938 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
CCDC9-203ENST00000596938 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 DACT2Q5SW24 774 aa13.25□□□□□ -0.29
CCDC9-203ENST00000596938 RBM26Q5T8P6 1007 aaKnown RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 ZNF594Q96JF6 807 aaPredicted RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 GLIS2Q9BZE0 524 aaPredicted RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 CNNM1Q9NRU3 951 aa13.25□□□□□ -0.29
CCDC9-203ENST00000596938 NOB1Q9ULX3 412 aaKnown RBP13.25□□□□□ -0.29
CCDC9-203ENST00000596938 MYO3BQ8WXR4 1341 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 KLRK1P26718 216 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 VEGFBP49765 207 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 TTLL5Q6EMB2 1281 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 USP48Q86UV5 1035 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
CCDC9-203ENST00000596938 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 DCPSQ96C86 337 aaKnown RBP13.24□□□□□ -0.29
CCDC9-203ENST00000596938 CD209Q9NNX6 404 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
CCDC9-203ENST00000596938 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
CCDC9-203ENST00000596938 SNAP23O00161 211 aa13.23□□□□□ -0.29
CCDC9-203ENST00000596938 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
CCDC9-203ENST00000596938 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
CCDC9-203ENST00000596938 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
CCDC9-203ENST00000596938 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
CCDC9-203ENST00000596938 IL1R1P14778 569 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 UBE4AQ14139 1066 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 SCARF1Q14162 830 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 KRT26Q7Z3Y9 468 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 SAPCD2Q86UD0 394 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 HHIPL1Q96JK4 782 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 PUS3Q9BZE2 481 aaKnown RBP13.22□□□□□ -0.29
CCDC9-203ENST00000596938 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
CCDC9-203ENST00000596938 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
CCDC9-203ENST00000596938 PLIN1O60240 522 aa13.21□□□□□ -0.29
CCDC9-203ENST00000596938 GTF2IP78347 998 aa13.21□□□□□ -0.29
CCDC9-203ENST00000596938 ZNF804AQ7Z570 1209 aa13.21□□□□□ -0.29
CCDC9-203ENST00000596938 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.29
CCDC9-203ENST00000596938 WDR33Q9C0J8 1336 aaKnown RBP13.2□□□□□ -0.3
CCDC9-203ENST00000596938 MYH3P11055 1940 aa13.2□□□□□ -0.3
CCDC9-203ENST00000596938 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
CCDC9-203ENST00000596938 HSPA1AP0DMV8 641 aaKnown RBP13.2□□□□□ -0.3
CCDC9-203ENST00000596938 HSPA1BP0DMV9 641 aaKnown RBP13.2□□□□□ -0.3
CCDC9-203ENST00000596938 ECE1P42892 770 aa13.2□□□□□ -0.3
CCDC9-203ENST00000596938 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
CCDC9-203ENST00000596938 SULF1Q8IWU6 871 aa13.2□□□□□ -0.3
CCDC9-203ENST00000596938 MXD3Q9BW11 206 aa13.2□□□□□ -0.3
CCDC9-203ENST00000596938 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 SASH1O94885 1247 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 UBTFL1P0CB47 393 aaPredicted RBP13.19□□□□□ -0.3
CCDC9-203ENST00000596938 HNRNPUQ00839 825 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC9-203ENST00000596938 ANGEL2Q5VTE6 544 aaKnown RBP13.19□□□□□ -0.3
CCDC9-203ENST00000596938 INTS3Q68E01 1043 aaKnown RBP13.19□□□□□ -0.3
CCDC9-203ENST00000596938 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 CAPNS2Q96L46 248 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
CCDC9-203ENST00000596938 ASTN2O75129 1339 aaPredicted RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 PDE8BO95263 885 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 HIBADHP31937 336 aaKnown RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 RFX5P48382 616 aaPredicted RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 TDRD7Q8NHU6 1098 aaKnown RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 FAM84BQ96KN1 310 aaPredicted RBP13.18□□□□□ -0.3
CCDC9-203ENST00000596938 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 WBP1LQ9NX94 342 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 SCN9AQ15858 1988 aa13.18□□□□□ -0.3
CCDC9-203ENST00000596938 ADM5C9JUS6 153 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 WNT10BO00744 389 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 MAP2K2P36507 400 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
CCDC9-203ENST00000596938 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 FBXO33Q7Z6M2 555 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 KIAA0825Q8IV33 1275 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 VGLL2Q8N8G2 317 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 C2orf69Q8N8R5 385 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
CCDC9-203ENST00000596938 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
CCDC9-203ENST00000596938 FAM205AQ6ZU69 1335 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 EYA2O00167 538 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 BCAR3O75815 825 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 GYG1P46976 350 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 MTMR14Q8NCE2 650 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
CCDC9-203ENST00000596938 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
CCDC9-203ENST00000596938 GNAI3P08754 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 303.8 ms