RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 IGHMBP2P38935 993 aaKnown RBP13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 G2E3Q7L622 706 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 GMLQ99445 158 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 RNF186Q9NXI6 227 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 MED23Q9ULK4 1368 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 ZNF609O15014 1411 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 PAPPA2Q9BXP8 1791 aa13.53□□□□□ -0.24
CHMP2A-202ENST00000596708 RGS19P49795 217 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 WWC1Q8IX03 1113 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 MXD3Q9BW11 206 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.25
CHMP2A-202ENST00000596708 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 H7C1W4 665 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 FKBP1BP68106 108 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 CCDC27Q2M243 656 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 NBPF9Q3BBW0 867 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 COA1Q9GZY4 146 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 LEMD3Q9Y2U8 911 aa13.51□□□□□ -0.25
CHMP2A-202ENST00000596708 MYO3BQ8WXR4 1341 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 ITGA6P23229 1130 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 PRAMEF18Q5VWM3 479 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 MOB2Q70IA6 237 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 TXNRD3Q86VQ6 643 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 RASAL3Q86YV0 1011 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 REM2Q8IYK8 340 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 MYH16Q9H6N6 1097 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 ECM29Q5VYK3 1845 aa13.5□□□□□ -0.25
CHMP2A-202ENST00000596708 ZNF804BA4D1E1 1349 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 UBE2Q2LH0YL09 131 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 KCNJ4P48050 445 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 FLIIQ13045 1269 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 GCKRQ14397 625 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 DACT2Q5SW24 774 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 DNAAF4Q8WXU2 420 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 ANKRD2Q9GZV1 360 aa13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 SALL2Q9Y467 1007 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-202ENST00000596708 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
CHMP2A-202ENST00000596708 WNT10BO00744 389 aa13.48□□□□□ -0.25
CHMP2A-202ENST00000596708 NF2P35240 595 aa13.48□□□□□ -0.25
CHMP2A-202ENST00000596708 HDAC9Q9UKV0 1011 aa13.48□□□□□ -0.25
CHMP2A-202ENST00000596708 IL16Q14005 1332 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 SASH1O94885 1247 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 GTF2IP78347 998 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 CHRNDQ07001 517 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 KIAA0825Q8IV33 1275 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 LINS1Q8NG48 757 aa13.47□□□□□ -0.25
CHMP2A-202ENST00000596708 CSF1RP07333 972 aa13.46□□□□□ -0.25
CHMP2A-202ENST00000596708 KLRK1P26718 216 aa13.46□□□□□ -0.25
CHMP2A-202ENST00000596708 MMP14P50281 582 aa13.46□□□□□ -0.25
CHMP2A-202ENST00000596708 PRKG1Q13976 671 aa13.46□□□□□ -0.25
CHMP2A-202ENST00000596708 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
CHMP2A-202ENST00000596708 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 PDE4DIPQ5VU43 2346 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 VAMP4O75379 141 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 CASP7P55210 303 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 CTU1Q7Z7A3 348 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 CD209Q9NNX6 404 aa13.45□□□□□ -0.26
CHMP2A-202ENST00000596708 TAF5LO75529 589 aa13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 TBC1D8O95759 1140 aa13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 IFIT5Q13325 482 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 APOBEC3FQ8IUX4 373 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 HELBQ8NG08 1087 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-202ENST00000596708 F6X3S4 739 aa13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 SNAP23O00161 211 aa13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 SOX10P56693 466 aa13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 NCBP3Q53F19 620 aaKnown RBP13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 ANGEL1Q9UNK9 670 aaKnown RBP13.43□□□□□ -0.26
CHMP2A-202ENST00000596708 F8W031 263 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 PLIN1O60240 522 aa13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 TM4SF4P48230 202 aa13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 TAF7LQ5H9L4 462 aa13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 ZNF296Q8WUU4 475 aaPredicted RBP13.42□□□□□ -0.26
CHMP2A-202ENST00000596708 ANP32CO43423 234 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 FOXO4P98177 505 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 SREBF2Q12772 1141 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 BEND3Q5T5X7 828 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 ZNF804AQ7Z570 1209 aa13.41□□□□□ -0.26
CHMP2A-202ENST00000596708 MYO1BO43795 1136 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms