RNA–Protein interactions for RNA: ENST00000593209.5

GHDC-212, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-212ENST00000593209 ADCK5Q3MIX3 580 aa22.69■■□□□ 1.22
GHDC-212ENST00000593209 SEC62Q99442 399 aaKnown RBP22.69■■□□□ 1.22
GHDC-212ENST00000593209 TM4SF1P30408 202 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 PTGER2P43116 358 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 CUL4AQ13619 759 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 SCARF1Q14162 830 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 ATP2B3Q16720 1220 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 SLFNL1Q499Z3 407 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 CREB3L3Q68CJ9 461 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 TNPO1Q92973 898 aaKnown RBP22.68■■□□□ 1.22
GHDC-212ENST00000593209 RPAP1Q9BWH6 1393 aaPredicted RBP22.68■■□□□ 1.22
GHDC-212ENST00000593209 CCDC129Q6ZRS4 1044 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 CNNM1Q9NRU3 951 aa22.68■■□□□ 1.22
GHDC-212ENST00000593209 MCM4P33991 863 aa22.67■■□□□ 1.22
GHDC-212ENST00000593209 SEC31BQ9NQW1 1179 aa22.67■■□□□ 1.22
GHDC-212ENST00000593209 DOCK2Q92608 1830 aa22.67■■□□□ 1.22
GHDC-212ENST00000593209 SLC27A2O14975 620 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 MMP10P09238 476 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 CPA1P15085 419 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 ERFEQ4G0M1 354 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 TAF6LQ9Y6J9 622 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 CYP2E1P05181 493 aaPredicted RBP22.66■■□□□ 1.22
GHDC-212ENST00000593209 COL9A3Q14050 684 aaPredicted RBP22.66■■□□□ 1.22
GHDC-212ENST00000593209 NOL8Q76FK4 1167 aaKnown RBP22.66■■□□□ 1.22
GHDC-212ENST00000593209 NBPF5PQ86XG9 351 aaPredicted RBP22.66■■□□□ 1.22
GHDC-212ENST00000593209 NLGN1Q8N2Q7 840 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 SGIP1Q9BQI5 828 aa22.66■■□□□ 1.22
GHDC-212ENST00000593209 CARMIL3Q8ND23 1372 aa22.65■■□□□ 1.22
GHDC-212ENST00000593209 PDE8BO95263 885 aa22.65■■□□□ 1.22
GHDC-212ENST00000593209 TTC39AQ5SRH9 613 aa22.65■■□□□ 1.22
GHDC-212ENST00000593209 TM6SF1Q9BZW5 370 aa22.65■■□□□ 1.22
GHDC-212ENST00000593209 DDR1Q08345 913 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 MCMDC2Q4G0Z9 681 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 CCDC158Q5M9N0 1113 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 ZMYM1Q5SVZ6 1142 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 TICAM2Q86XR7 235 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 IL27Q8NEV9 243 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 NYXQ9GZU5 481 aa22.64■■□□□ 1.22
GHDC-212ENST00000593209 CASTP20810 708 aaKnown RBP22.64■■□□□ 1.21
GHDC-212ENST00000593209 FGFR2P21802 821 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 POLD1P28340 1107 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 AK2P54819 239 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 TPTE2Q6XPS3 522 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 C3orf67Q6ZVT6 689 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 JAKMIP1Q96N16 626 aaKnown RBP22.64■■□□□ 1.21
GHDC-212ENST00000593209 ZSWIM6Q9HCJ5 1215 aa22.64■■□□□ 1.21
GHDC-212ENST00000593209 PKP1Q13835 747 aa22.63■■□□□ 1.21
GHDC-212ENST00000593209 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
GHDC-212ENST00000593209 CCDC24Q8N4L8 307 aa22.63■■□□□ 1.21
GHDC-212ENST00000593209 TNRC6CQ9HCJ0 1690 aaKnown RBP22.63■■□□□ 1.21
GHDC-212ENST00000593209 MROH5Q6ZUA9 1318 aa22.62■■□□□ 1.21
GHDC-212ENST00000593209 POLRMTO00411 1230 aaKnown RBP22.62■■□□□ 1.21
GHDC-212ENST00000593209 RUFY3Q7L099 469 aa22.62■■□□□ 1.21
GHDC-212ENST00000593209 CWC22Q9HCG8 908 aaKnown RBP22.62■■□□□ 1.21
GHDC-212ENST00000593209 MAST3O60307 1309 aa22.62■■□□□ 1.21
GHDC-212ENST00000593209 GTF2E1P29083 439 aaPredicted RBP22.61■■□□□ 1.21
GHDC-212ENST00000593209 MCAMP43121 646 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 ZAP70P43403 619 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 CCDC152Q4G0S7 254 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 SLC10A5Q5PT55 438 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 GORABQ5T7V8 394 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 HELLSQ9NRZ9 838 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 SERPINB2P05120 415 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 GSE1Q14687 1217 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 KLHL34Q8N239 644 aa22.61■■□□□ 1.21
GHDC-212ENST00000593209 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
GHDC-212ENST00000593209 ZNF512BQ96KM6 892 aaPredicted RBP22.61■■□□□ 1.21
GHDC-212ENST00000593209 RNF113AO15541 343 aaKnown RBP22.6■■□□□ 1.21
GHDC-212ENST00000593209 KCNJ4P48050 445 aa22.6■■□□□ 1.21
GHDC-212ENST00000593209 FKBP4Q02790 459 aaKnown RBP eCLIP22.6■■□□□ 1.21
GHDC-212ENST00000593209 PPP1R1BQ9UD71 204 aaPredicted RBP22.6■■□□□ 1.21
GHDC-212ENST00000593209 ZDHHC9Q9Y397 364 aa22.6■■□□□ 1.21
GHDC-212ENST00000593209 PUM3Q15397 648 aaKnown RBP22.59■■□□□ 1.21
GHDC-212ENST00000593209 TSGA10IPQ3SY00 556 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 INTS4Q96HW7 963 aaKnown RBP22.59■■□□□ 1.21
GHDC-212ENST00000593209 PARP3Q9Y6F1 533 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 M0R2C6 588 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 ZKSCAN1P17029 563 aaPredicted RBP22.59■■□□□ 1.21
GHDC-212ENST00000593209 CLEC17AQ6ZS10 378 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 CNBD1Q8NA66 436 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 NRXN2Q9P2S2 1712 aa22.59■■□□□ 1.21
GHDC-212ENST00000593209 SNAP23O00161 211 aa22.58■■□□□ 1.21
GHDC-212ENST00000593209 LARGE1O95461 756 aa22.58■■□□□ 1.21
GHDC-212ENST00000593209 ARID4AP29374 1257 aaPredicted RBP22.58■■□□□ 1.21
GHDC-212ENST00000593209 PHKA1P46020 1223 aa22.58■■□□□ 1.21
GHDC-212ENST00000593209 VPS53Q5VIR6 699 aa22.58■■□□□ 1.21
GHDC-212ENST00000593209 HMG20BQ9P0W2 317 aa22.58■■□□□ 1.21
GHDC-212ENST00000593209 HSP90B1P14625 803 aaKnown RBP22.57■■□□□ 1.2
GHDC-212ENST00000593209 LARP6Q9BRS8 491 aaKnown RBP22.57■■□□□ 1.2
GHDC-212ENST00000593209 NUCB2P80303 420 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 SF3B3Q15393 1217 aaKnown RBP22.57■■□□□ 1.2
GHDC-212ENST00000593209 CCDC102BQ68D86 513 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 LPIN2Q92539 896 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 OSBP2Q969R2 916 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 PDRG1Q9NUG6 133 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 CYP46A1Q9Y6A2 500 aa22.57■■□□□ 1.2
GHDC-212ENST00000593209 U3KPZ7 1027 aaPredicted RBP22.57■■□□□ 1.2
GHDC-212ENST00000593209 NPHP1O15259 732 aa22.56■■□□□ 1.2
GHDC-212ENST00000593209 RNF20Q5VTR2 975 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms