RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 HYPKQ9NX55 129 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 XDHP47989 1333 aa11.34□□□□□ -0.59
SMAD4-215ENST00000592911 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
SMAD4-215ENST00000592911 RIMBP2O15034 1052 aa11.33□□□□□ -0.6
SMAD4-215ENST00000592911 FKTNO75072 461 aa11.33□□□□□ -0.6
SMAD4-215ENST00000592911 CCDC152Q4G0S7 254 aa11.33□□□□□ -0.6
SMAD4-215ENST00000592911 RBM26Q5T8P6 1007 aaKnown RBP11.33□□□□□ -0.6
SMAD4-215ENST00000592911 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
SMAD4-215ENST00000592911 TSPYL2Q9H2G4 693 aaPredicted RBP11.33□□□□□ -0.6
SMAD4-215ENST00000592911 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
SMAD4-215ENST00000592911 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-215ENST00000592911 ECM29Q5VYK3 1845 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 CEP290O15078 2479 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 CHL1O00533 1208 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 IRS4O14654 1257 aaPredicted RBP11.32□□□□□ -0.6
SMAD4-215ENST00000592911 UFL1O94874 794 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 ATP2B4P23634 1241 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 RIPK4P57078 832 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
SMAD4-215ENST00000592911 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 ARMC9Q7Z3E5 817 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 FAM212AQ96EL1 285 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
SMAD4-215ENST00000592911 HTTP42858 3142 aa11.31□□□□□ -0.6
SMAD4-215ENST00000592911 MED23Q9ULK4 1368 aa11.31□□□□□ -0.6
SMAD4-215ENST00000592911 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 ZBTB48P10074 688 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 DOK7Q18PE1 504 aa11.31□□□□□ -0.6
SMAD4-215ENST00000592911 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
SMAD4-215ENST00000592911 CCDC191Q8NCU4 936 aa11.31□□□□□ -0.6
SMAD4-215ENST00000592911 FAM89AQ96GI7 184 aa11.31□□□□□ -0.6
SMAD4-215ENST00000592911 ANXA1P04083 346 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 TMPOP42166 694 aaKnown RBP11.3□□□□□ -0.6
SMAD4-215ENST00000592911 GSE1Q14687 1217 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 MAP3K11Q16584 847 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 HDGFL1Q5TGJ6 251 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 STRIP1Q5VSL9 837 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 DLK2Q6UY11 383 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 KCNQ5Q9NR82 932 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 CHPF2Q9P2E5 772 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
SMAD4-215ENST00000592911 CENPFP49454 3210 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 HAX1O00165 279 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 PDE8AO60658 829 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 TBC1D8O95759 1140 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 PCCAP05165 728 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-215ENST00000592911 LDLRAD1Q5T700 205 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
SMAD4-215ENST00000592911 COA1Q9GZY4 146 aa11.29□□□□□ -0.6
SMAD4-215ENST00000592911 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 ARHGEF6Q15052 776 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 OTUD7BQ6GQQ9 843 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 ARMC5Q96C12 935 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 ERO1AQ96HE7 468 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 CACNA1FO60840 1977 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 ASTN2O75129 1339 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-215ENST00000592911 BRCA2P51587 3418 aa11.28□□□□□ -0.6
SMAD4-215ENST00000592911 TRIOBPQ9H2D6 2365 aa11.27□□□□□ -0.6
SMAD4-215ENST00000592911 COL4A1P02462 1669 aa11.27□□□□□ -0.6
SMAD4-215ENST00000592911 UBE2Q2LH0YL09 131 aa11.27□□□□□ -0.61
SMAD4-215ENST00000592911 WNT10BO00744 389 aa11.27□□□□□ -0.61
SMAD4-215ENST00000592911 EVX2Q03828 476 aa11.27□□□□□ -0.61
SMAD4-215ENST00000592911 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-215ENST00000592911 DACT2Q5SW24 774 aa11.27□□□□□ -0.61
SMAD4-215ENST00000592911 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
SMAD4-215ENST00000592911 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-215ENST00000592911 RALBP1Q15311 655 aa11.26□□□□□ -0.61
SMAD4-215ENST00000592911 OTOP1Q7RTM1 612 aa11.26□□□□□ -0.61
SMAD4-215ENST00000592911 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
SMAD4-215ENST00000592911 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
SMAD4-215ENST00000592911 ATP5J2-PTCD1G3V325 749 aa11.25□□□□□ -0.61
SMAD4-215ENST00000592911 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-215ENST00000592911 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
SMAD4-215ENST00000592911 RIC3Q7Z5B4 369 aa11.25□□□□□ -0.61
SMAD4-215ENST00000592911 IFNL1Q8IU54 200 aa11.25□□□□□ -0.61
SMAD4-215ENST00000592911 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-215ENST00000592911 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
SMAD4-215ENST00000592911 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
SMAD4-215ENST00000592911 CALD1Q05682 793 aaKnown RBP11.24□□□□□ -0.61
SMAD4-215ENST00000592911 NBPF9Q3BBW0 867 aa11.24□□□□□ -0.61
SMAD4-215ENST00000592911 SUPT20HL1Q3ZLR7 823 aa11.24□□□□□ -0.61
SMAD4-215ENST00000592911 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
SMAD4-215ENST00000592911 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
SMAD4-215ENST00000592911 TRIM17Q9Y577 477 aa11.24□□□□□ -0.61
SMAD4-215ENST00000592911 TESPA1A2RU30 521 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-215ENST00000592911 CCT4P50991 539 aaKnown RBP11.23□□□□□ -0.61
SMAD4-215ENST00000592911 FXR1P51114 621 aaKnown RBP eCLIP11.23□□□□□ -0.61
SMAD4-215ENST00000592911 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
SMAD4-215ENST00000592911 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
SMAD4-215ENST00000592911 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
SMAD4-215ENST00000592911 NBPF11Q86T75 865 aa11.23□□□□□ -0.61
SMAD4-215ENST00000592911 SLC10A4Q96EP9 437 aa11.23□□□□□ -0.61
SMAD4-215ENST00000592911 ANKRD2Q9GZV1 360 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms