RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 APPBP2Q92624 585 aa12.38□□□□□ -0.43
VPS25-203ENST00000589520 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
VPS25-203ENST00000589520 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
VPS25-203ENST00000589520 SMC3Q9UQE7 1217 aa12.38□□□□□ -0.43
VPS25-203ENST00000589520 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
VPS25-203ENST00000589520 ATRNO75882 1429 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 ZBTB22O15209 634 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
VPS25-203ENST00000589520 ADRA2BP18089 450 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 ADORA1P30542 326 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 ADCK5Q3MIX3 580 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 TPTE2Q6XPS3 522 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
VPS25-203ENST00000589520 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
VPS25-203ENST00000589520 HSPD1P10809 573 aaKnown RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 PDCP20941 246 aa12.36□□□□□ -0.43
VPS25-203ENST00000589520 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
VPS25-203ENST00000589520 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 ANKRD18AQ8IVF6 992 aa12.36□□□□□ -0.43
VPS25-203ENST00000589520 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
VPS25-203ENST00000589520 GNL3LQ9NVN8 582 aaKnown RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 BSDC1Q9NW68 430 aaPredicted RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 CEP350Q5VT06 3117 aa12.36□□□□□ -0.43
VPS25-203ENST00000589520 COL5A3P25940 1745 aaPredicted RBP12.36□□□□□ -0.43
VPS25-203ENST00000589520 ZAP70P43403 619 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 UBE4AQ14139 1066 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 IMMTQ16891 758 aaKnown RBP12.35□□□□□ -0.43
VPS25-203ENST00000589520 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 TRAPPC3LQ5T215 181 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 FAM196AQ6ZSG2 479 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
VPS25-203ENST00000589520 SEPT12Q8IYM1 358 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
VPS25-203ENST00000589520 MYH3P11055 1940 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 MAST3O60307 1309 aa12.35□□□□□ -0.43
VPS25-203ENST00000589520 CYP21A2P08686 494 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 ADD2P35612 726 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 MCAMP43121 646 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 WASHC4Q2M389 1173 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 ZDHHC9Q9Y397 364 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
VPS25-203ENST00000589520 FAM177BA6PVY3 158 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 GNPATO15228 680 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 STX6O43752 255 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 MBD3O95983 291 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 CHRNDQ07001 517 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 ME3Q16798 604 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 NOL8Q76FK4 1167 aaKnown RBP12.33□□□□□ -0.44
VPS25-203ENST00000589520 SPATA5Q8NB90 893 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 OSBP2Q969R2 916 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 LLPHQ9BRT6 129 aaKnown RBP12.33□□□□□ -0.44
VPS25-203ENST00000589520 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 KIF3AQ9Y496 699 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
VPS25-203ENST00000589520 MYH14Q7Z406 1995 aaKnown RBP12.32□□□□□ -0.44
VPS25-203ENST00000589520 SEMA3EO15041 775 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 GNAT2P19087 354 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
VPS25-203ENST00000589520 RFC4P35249 363 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 EXOSC10Q01780 885 aaKnown RBP12.32□□□□□ -0.44
VPS25-203ENST00000589520 ALX1Q15699 326 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 ERFEQ4G0M1 354 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 SLC9C2Q5TAH2 1124 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 MCTP1Q6DN14 999 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 CCDC129Q6ZRS4 1044 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
VPS25-203ENST00000589520 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 BCL2L12Q9HB09 334 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 TPCN1Q9ULQ1 816 aa12.32□□□□□ -0.44
VPS25-203ENST00000589520 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
VPS25-203ENST00000589520 BCORQ6W2J9 1755 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 GOLGA6L3A6NEY3 463 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 M0R2C6 588 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 ZSCAN22P10073 491 aaPredicted RBP12.31□□□□□ -0.44
VPS25-203ENST00000589520 PHKA1P46020 1223 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 FGD1P98174 961 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 TOB2Q14106 344 aaPredicted RBP12.31□□□□□ -0.44
VPS25-203ENST00000589520 SCARF1Q14162 830 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 CAVIN4Q5BKX8 364 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 CCDC83Q8IWF9 413 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
VPS25-203ENST00000589520 ZMYM6O95789 1325 aa12.31□□□□□ -0.44
VPS25-203ENST00000589520 E7EWF7 191 aa12.3□□□□□ -0.44
VPS25-203ENST00000589520 ZNF213O14771 459 aa12.3□□□□□ -0.44
VPS25-203ENST00000589520 GPAA1O43292 621 aa12.3□□□□□ -0.44
VPS25-203ENST00000589520 CPA1P15085 419 aa12.3□□□□□ -0.44
VPS25-203ENST00000589520 SYT1P21579 422 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms