RNA–Protein interactions for RNA: ENST00000588909.1

TPGS2-208, Transcript of tubulin polyglutamylase complex subunit 2, human

TSL 5

Gene TPGS2, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPGS2-208	ENST00000588909	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.6	■■■□□ 2.81
TPGS2-208	ENST00000588909	USP17L1	Q7RTZ2	530 aa		32.6	■■■□□ 2.81
TPGS2-208	ENST00000588909	TRMT2A	Q8IZ69	625 aa	Known RBP	32.6	■■■□□ 2.81
TPGS2-208	ENST00000588909	ASTN2	O75129	1339 aa	Predicted RBP	32.59	■■■□□ 2.81
TPGS2-208	ENST00000588909	CCDC57	Q2TAC2	916 aa		32.59	■■■□□ 2.81
TPGS2-208	ENST00000588909	TAF7L	Q5H9L4	462 aa		32.59	■■■□□ 2.81
TPGS2-208	ENST00000588909	KAZALD1	Q96I82	304 aa		32.59	■■■□□ 2.81
TPGS2-208	ENST00000588909	SMC4	Q9NTJ3	1288 aa		32.59	■■■□□ 2.81
TPGS2-208	ENST00000588909	PTPRC	P08575	1304 aa		32.58	■■■□□ 2.81
TPGS2-208	ENST00000588909	GRM1	Q13255	1194 aa		32.58	■■■□□ 2.81
TPGS2-208	ENST00000588909	CDC37L1	Q7L3B6	337 aa		32.58	■■■□□ 2.81
TPGS2-208	ENST00000588909	AGBL3	Q8NEM8	1001 aa		32.57	■■■□□ 2.8
TPGS2-208	ENST00000588909	PLIN1	O60240	522 aa		32.56	■■■□□ 2.8
TPGS2-208	ENST00000588909	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.56	■■■□□ 2.8
TPGS2-208	ENST00000588909	GML	Q99445	158 aa		32.56	■■■□□ 2.8
TPGS2-208	ENST00000588909	COA1	Q9GZY4	146 aa		32.56	■■■□□ 2.8
TPGS2-208	ENST00000588909	ADM5	C9JUS6	153 aa		32.55	■■■□□ 2.8
TPGS2-208	ENST00000588909	LDHAL6A	Q6ZMR3	332 aa		32.55	■■■□□ 2.8
TPGS2-208	ENST00000588909	KRT26	Q7Z3Y9	468 aa		32.55	■■■□□ 2.8
TPGS2-208	ENST00000588909	TRPM7	Q96QT4	1865 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	WDR33	Q9C0J8	1336 aa	Known RBP	32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	ZNF280A	P59817	542 aa	Predicted RBP	32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	ALDH1L2	Q3SY69	923 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	DACT2	Q5SW24	774 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	CYP4F22	Q6NT55	531 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	MIER1	Q8N108	512 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	BICC1	Q9H694	974 aa	Known RBP	32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	CNNM1	Q9NRU3	951 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	GGA3	Q9NZ52	723 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	TLL2	Q9Y6L7	1015 aa		32.54	■■■□□ 2.8
TPGS2-208	ENST00000588909	USP17L8	P0C7I0	530 aa		32.53	■■■□□ 2.8
TPGS2-208	ENST00000588909	DCPS	Q96C86	337 aa	Known RBP	32.53	■■■□□ 2.8
TPGS2-208	ENST00000588909	PSME4	Q14997	1843 aa		32.53	■■■□□ 2.8
TPGS2-208	ENST00000588909	UTY	O14607	1347 aa		32.52	■■■□□ 2.8
TPGS2-208	ENST00000588909	PUS3	Q9BZE2	481 aa	Known RBP	32.52	■■■□□ 2.8
TPGS2-208	ENST00000588909	SCARF1	Q14162	830 aa		32.51	■■■□□ 2.79
TPGS2-208	ENST00000588909	MYOZ2	Q9NPC6	264 aa		32.51	■■■□□ 2.79
TPGS2-208	ENST00000588909	ZNF609	O15014	1411 aa		32.51	■■■□□ 2.79
TPGS2-208	ENST00000588909	DIEXF	Q68CQ4	756 aa	Known RBP	32.5	■■■□□ 2.79
TPGS2-208	ENST00000588909	CAPNS2	Q96L46	248 aa		32.5	■■■□□ 2.79
TPGS2-208	ENST00000588909	IRS2	Q9Y4H2	1338 aa		32.5	■■■□□ 2.79
TPGS2-208	ENST00000588909	GTF2I	P78347	998 aa		32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	IFFO2	Q5TF58	517 aa		32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	STRIP1	Q5VSL9	837 aa		32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	ANGEL2	Q5VTE6	544 aa	Known RBP	32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	TTLL5	Q6EMB2	1281 aa		32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	SAPCD2	Q86UD0	394 aa		32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909	SCAF8	Q9UPN6	1271 aa	Known RBP	32.49	■■■□□ 2.79
TPGS2-208	ENST00000588909		A0A1B0GUL6	1792 aa		32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	FOXN1	O15353	648 aa		32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	ANKRD44	Q8N8A2	993 aa		32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	USP44	Q9H0E7	712 aa		32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	CD209	Q9NNX6	404 aa		32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	NOB1	Q9ULX3	412 aa	Known RBP	32.48	■■■□□ 2.79
TPGS2-208	ENST00000588909	ZNF646	O15015	1829 aa	Predicted RBP	32.47	■■■□□ 2.79
TPGS2-208	ENST00000588909	AOC2	O75106	756 aa		32.45	■■■□□ 2.79
TPGS2-208	ENST00000588909	SULF1	Q8IWU6	871 aa		32.45	■■■□□ 2.79
TPGS2-208	ENST00000588909	JAG2	Q9Y219	1238 aa		32.45	■■■□□ 2.79
TPGS2-208	ENST00000588909	NBPF9	Q3BBW0	867 aa		32.44	■■■□□ 2.78
TPGS2-208	ENST00000588909	RABL6	Q3YEC7	729 aa	Predicted RBP	32.44	■■■□□ 2.78
TPGS2-208	ENST00000588909	KIAA0825	Q8IV33	1275 aa		32.44	■■■□□ 2.78
TPGS2-208	ENST00000588909	POLR2A	P24928	1970 aa	Known RBP	32.44	■■■□□ 2.78
TPGS2-208	ENST00000588909	CT47B1	P0C2W7	299 aa	Predicted RBP	32.43	■■■□□ 2.78
TPGS2-208	ENST00000588909	C15orf52	Q6ZUT6	534 aa	Known RBP	32.43	■■■□□ 2.78
TPGS2-208	ENST00000588909	KLHDC4	Q8TBB5	520 aa		32.43	■■■□□ 2.78
TPGS2-208	ENST00000588909	AIDA	Q96BJ3	306 aa		32.43	■■■□□ 2.78
TPGS2-208	ENST00000588909	WBP1L	Q9NX94	342 aa		32.43	■■■□□ 2.78
TPGS2-208	ENST00000588909	ECE1	P42892	770 aa		32.42	■■■□□ 2.78
TPGS2-208	ENST00000588909	LRRC24	Q50LG9	513 aa		32.42	■■■□□ 2.78
TPGS2-208	ENST00000588909	ZNF804A	Q7Z570	1209 aa		32.42	■■■□□ 2.78
TPGS2-208	ENST00000588909	OGFOD1	Q8N543	542 aa		32.42	■■■□□ 2.78
TPGS2-208	ENST00000588909	MYO3B	Q8WXR4	1341 aa		32.42	■■■□□ 2.78
TPGS2-208	ENST00000588909	SASH1	O94885	1247 aa		32.41	■■■□□ 2.78
TPGS2-208	ENST00000588909	RARS	P54136	660 aa	Known RBP	32.41	■■■□□ 2.78
TPGS2-208	ENST00000588909	HUNK	P57058	714 aa		32.4	■■■□□ 2.78
TPGS2-208	ENST00000588909	CERS5	Q8N5B7	392 aa		32.4	■■■□□ 2.78
TPGS2-208	ENST00000588909	CDCA5	Q96FF9	252 aa		32.4	■■■□□ 2.78
TPGS2-208	ENST00000588909	RIPOR2	Q9Y4F9	1068 aa		32.4	■■■□□ 2.78
TPGS2-208	ENST00000588909	GBA2	Q9HCG7	927 aa	Predicted RBP	32.39	■■■□□ 2.78
TPGS2-208	ENST00000588909	IL1R1	P14778	569 aa		32.38	■■■□□ 2.77
TPGS2-208	ENST00000588909	GYG1	P46976	350 aa		32.38	■■■□□ 2.77
TPGS2-208	ENST00000588909		F8W031	263 aa	Predicted RBP	32.37	■■■□□ 2.77
TPGS2-208	ENST00000588909	WNT10B	O00744	389 aa		32.37	■■■□□ 2.77
TPGS2-208	ENST00000588909	PRAMEF18	Q5VWM3	479 aa		32.37	■■■□□ 2.77
TPGS2-208	ENST00000588909	MAP2K1	Q02750	393 aa	Predicted RBP	32.36	■■■□□ 2.77
TPGS2-208	ENST00000588909	C2orf69	Q8N8R5	385 aa		32.36	■■■□□ 2.77
TPGS2-208	ENST00000588909	MROH5	Q6ZUA9	1318 aa		32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	UBE4A	Q14139	1066 aa		32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	METTL24	Q5JXM2	366 aa		32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	TNS4	Q8IZW8	715 aa		32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	API5	Q9BZZ5	524 aa	Known RBP	32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	HDAC9	Q9UKV0	1011 aa		32.35	■■■□□ 2.77
TPGS2-208	ENST00000588909	HHIPL1	Q96JK4	782 aa		32.34	■■■□□ 2.77
TPGS2-208	ENST00000588909	PCDHAC2	Q9Y5I4	1007 aa		32.34	■■■□□ 2.77
TPGS2-208	ENST00000588909	THSD7B	Q9C0I4	1608 aa		32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	PITPNM2	Q9BZ72	1349 aa		32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	CTCF	P49711	727 aa	Predicted RBP	32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	LBX1	P52954	281 aa		32.33	■■■□□ 2.77
TPGS2-208	ENST00000588909	BRPF1	P55201	1214 aa	Predicted RBP	32.33	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms