RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DCAF8Q5TAQ9 597 aa23.72■■□□□ 1.39
CCDC43-204ENST00000588687 RNF186Q9NXI6 227 aa23.72■■□□□ 1.39
CCDC43-204ENST00000588687 CCDC184Q52MB2 194 aa23.71■■□□□ 1.39
CCDC43-204ENST00000588687 DACT2Q5SW24 774 aa23.71■■□□□ 1.39
CCDC43-204ENST00000588687 G2E3Q7L622 706 aa23.71■■□□□ 1.39
CCDC43-204ENST00000588687 CSRNP1Q96S65 589 aa23.71■■□□□ 1.39
CCDC43-204ENST00000588687 CHMP4AQ9BY43 222 aa23.71■■□□□ 1.39
CCDC43-204ENST00000588687 FKBP1BP68106 108 aa23.7■■□□□ 1.38
CCDC43-204ENST00000588687 CCDC27Q2M243 656 aa23.7■■□□□ 1.38
CCDC43-204ENST00000588687 HTTP42858 3142 aa23.69■■□□□ 1.38
CCDC43-204ENST00000588687 H7C1W4 665 aa23.69■■□□□ 1.38
CCDC43-204ENST00000588687 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
CCDC43-204ENST00000588687 TXNRD3Q86VQ6 643 aa23.69■■□□□ 1.38
CCDC43-204ENST00000588687 MXD3Q9BW11 206 aa23.69■■□□□ 1.38
CCDC43-204ENST00000588687 SCAF8Q9UPN6 1271 aaKnown RBP23.69■■□□□ 1.38
CCDC43-204ENST00000588687 TRPA1O75762 1119 aa23.68■■□□□ 1.38
CCDC43-204ENST00000588687 CASP7P55210 303 aa23.68■■□□□ 1.38
CCDC43-204ENST00000588687 NBPF9Q3BBW0 867 aa23.68■■□□□ 1.38
CCDC43-204ENST00000588687 UBE3BQ7Z3V4 1068 aa23.68■■□□□ 1.38
CCDC43-204ENST00000588687 CACNA1FO60840 1977 aa23.67■■□□□ 1.38
CCDC43-204ENST00000588687 MOB2Q70IA6 237 aa23.67■■□□□ 1.38
CCDC43-204ENST00000588687 WWC1Q8IX03 1113 aa23.67■■□□□ 1.38
CCDC43-204ENST00000588687 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
CCDC43-204ENST00000588687 SLC34A2O95436 690 aa23.66■■□□□ 1.38
CCDC43-204ENST00000588687 KLRK1P26718 216 aa23.66■■□□□ 1.38
CCDC43-204ENST00000588687 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
CCDC43-204ENST00000588687 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
CCDC43-204ENST00000588687 STK31Q9BXU1 1019 aa23.66■■□□□ 1.38
CCDC43-204ENST00000588687 WNT10BO00744 389 aa23.65■■□□□ 1.38
CCDC43-204ENST00000588687 STRIP1Q5VSL9 837 aa23.65■■□□□ 1.38
CCDC43-204ENST00000588687 COA1Q9GZY4 146 aa23.65■■□□□ 1.38
CCDC43-204ENST00000588687 MYO3BQ8WXR4 1341 aa23.64■■□□□ 1.38
CCDC43-204ENST00000588687 IRS2Q9Y4H2 1338 aa23.64■■□□□ 1.38
CCDC43-204ENST00000588687 GCKRQ14397 625 aa23.64■■□□□ 1.37
CCDC43-204ENST00000588687 PDE4DIPQ5VU43 2346 aa23.64■■□□□ 1.37
CCDC43-204ENST00000588687 IL16Q14005 1332 aa23.63■■□□□ 1.37
CCDC43-204ENST00000588687 LAMB1P07942 1786 aa23.63■■□□□ 1.37
CCDC43-204ENST00000588687 FLIIQ13045 1269 aa23.63■■□□□ 1.37
CCDC43-204ENST00000588687 PRAMEF18Q5VWM3 479 aa23.63■■□□□ 1.37
CCDC43-204ENST00000588687 LEMD3Q9Y2U8 911 aa23.63■■□□□ 1.37
CCDC43-204ENST00000588687 ECM29Q5VYK3 1845 aa23.62■■□□□ 1.37
CCDC43-204ENST00000588687 SLC4A2P04920 1241 aa23.62■■□□□ 1.37
CCDC43-204ENST00000588687 CSF1RP07333 972 aa23.62■■□□□ 1.37
CCDC43-204ENST00000588687 ITGA6P23229 1130 aa23.62■■□□□ 1.37
CCDC43-204ENST00000588687 REM2Q8IYK8 340 aaPredicted RBP23.62■■□□□ 1.37
CCDC43-204ENST00000588687 ZBED3Q96IU2 234 aaPredicted RBP23.62■■□□□ 1.37
CCDC43-204ENST00000588687 ZNF804BA4D1E1 1349 aa23.61■■□□□ 1.37
CCDC43-204ENST00000588687 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
CCDC43-204ENST00000588687 SASH1O94885 1247 aa23.6■■□□□ 1.37
CCDC43-204ENST00000588687 IGHMBP2P38935 993 aaKnown RBP23.6■■□□□ 1.37
CCDC43-204ENST00000588687 NCBP3Q53F19 620 aaKnown RBP23.6■■□□□ 1.37
CCDC43-204ENST00000588687 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
CCDC43-204ENST00000588687 CENPFP49454 3210 aa23.58■■□□□ 1.37
CCDC43-204ENST00000588687 SSC5DA1L4H1 1573 aa23.58■■□□□ 1.37
CCDC43-204ENST00000588687 CTU1Q7Z7A3 348 aaKnown RBP23.58■■□□□ 1.37
CCDC43-204ENST00000588687 OGFOD1Q8N543 542 aa23.58■■□□□ 1.37
CCDC43-204ENST00000588687 LINS1Q8NG48 757 aa23.58■■□□□ 1.37
CCDC43-204ENST00000588687 DNAAF4Q8WXU2 420 aa23.58■■□□□ 1.37
CCDC43-204ENST00000588687 COL1A1P02452 1464 aaPredicted RBP23.57■■□□□ 1.36
CCDC43-204ENST00000588687 MMP14P50281 582 aa23.57■■□□□ 1.36
CCDC43-204ENST00000588687 CHRNDQ07001 517 aa23.57■■□□□ 1.36
CCDC43-204ENST00000588687 FBXW7Q969H0 707 aa23.57■■□□□ 1.36
CCDC43-204ENST00000588687 ANKRD2Q9GZV1 360 aa23.57■■□□□ 1.36
CCDC43-204ENST00000588687 TTLL5Q6EMB2 1281 aa23.56■■□□□ 1.36
CCDC43-204ENST00000588687 KIAA0825Q8IV33 1275 aa23.56■■□□□ 1.36
CCDC43-204ENST00000588687 CERS5Q8N5B7 392 aa23.56■■□□□ 1.36
CCDC43-204ENST00000588687 MKI67P46013 3256 aaKnown RBP23.55■■□□□ 1.36
CCDC43-204ENST00000588687 SNAP23O00161 211 aa23.55■■□□□ 1.36
CCDC43-204ENST00000588687 FKBP5Q13451 457 aaPredicted RBP23.55■■□□□ 1.36
CCDC43-204ENST00000588687 C15orf52Q6ZUT6 534 aaKnown RBP23.55■■□□□ 1.36
CCDC43-204ENST00000588687 MYH16Q9H6N6 1097 aa23.55■■□□□ 1.36
CCDC43-204ENST00000588687 BRCA2P51587 3418 aa23.55■■□□□ 1.36
CCDC43-204ENST00000588687 VAMP4O75379 141 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 TM4SF4P48230 202 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 SOX10P56693 466 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 GTF2IP78347 998 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 FOXO4P98177 505 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 APOBEC3FQ8IUX4 373 aaKnown RBP23.54■■□□□ 1.36
CCDC43-204ENST00000588687 MPHOSPH8Q99549 860 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 CD209Q9NNX6 404 aa23.54■■□□□ 1.36
CCDC43-204ENST00000588687 LDLRAD1Q5T700 205 aa23.53■■□□□ 1.36
CCDC43-204ENST00000588687 ZNF296Q8WUU4 475 aaPredicted RBP23.53■■□□□ 1.36
CCDC43-204ENST00000588687 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
CCDC43-204ENST00000588687 TBC1D8O95759 1140 aa23.52■■□□□ 1.36
CCDC43-204ENST00000588687 PTPN12Q05209 780 aaKnown RBP23.52■■□□□ 1.36
CCDC43-204ENST00000588687 NOM1Q5C9Z4 860 aaKnown RBP23.52■■□□□ 1.36
CCDC43-204ENST00000588687 CFHR5Q9BXR6 569 aa23.52■■□□□ 1.36
CCDC43-204ENST00000588687 NF2P35240 595 aa23.51■■□□□ 1.35
CCDC43-204ENST00000588687 TTLL12Q14166 644 aaPredicted RBP23.51■■□□□ 1.35
CCDC43-204ENST00000588687 BEND3Q5T5X7 828 aa23.51■■□□□ 1.35
CCDC43-204ENST00000588687 MTMR14Q8NCE2 650 aa23.51■■□□□ 1.35
CCDC43-204ENST00000588687 HPS5Q9UPZ3 1129 aa23.51■■□□□ 1.35
CCDC43-204ENST00000588687 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 TAF5LO75529 589 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 HDAC9Q9UKV0 1011 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 PCDHAC2Q9Y5I4 1007 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 OTOFQ9HC10 1997 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 AOX1Q06278 1338 aa23.5■■□□□ 1.35
CCDC43-204ENST00000588687 F6X3S4 739 aa23.49■■□□□ 1.35
CCDC43-204ENST00000588687 IL1R1P14778 569 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms