RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 HOXB7P09629 217 aa23.37■■□□□ 1.33
CXXC1-210ENST00000587396 GOLGA2Q08379 1002 aa23.37■■□□□ 1.33
CXXC1-210ENST00000587396 TRIM17Q9Y577 477 aa23.37■■□□□ 1.33
CXXC1-210ENST00000587396 PCCAP05165 728 aaPredicted RBP23.36■■□□□ 1.33
CXXC1-210ENST00000587396 SPRYD7Q5W111 196 aa23.36■■□□□ 1.33
CXXC1-210ENST00000587396 ARMC9Q7Z3E5 817 aa23.36■■□□□ 1.33
CXXC1-210ENST00000587396 OGFOD1Q8N543 542 aa23.36■■□□□ 1.33
CXXC1-210ENST00000587396 ANGEL1Q9UNK9 670 aaKnown RBP23.35■■□□□ 1.33
CXXC1-210ENST00000587396 ELL2O00472 640 aaPredicted RBP23.34■■□□□ 1.33
CXXC1-210ENST00000587396 HSP90B1P14625 803 aaKnown RBP23.34■■□□□ 1.33
CXXC1-210ENST00000587396 OTOP1Q7RTM1 612 aa23.34■■□□□ 1.33
CXXC1-210ENST00000587396 TXNRD3Q86VQ6 643 aa23.34■■□□□ 1.33
CXXC1-210ENST00000587396 CCDC191Q8NCU4 936 aa23.34■■□□□ 1.33
CXXC1-210ENST00000587396 CFHR5Q9BXR6 569 aa23.34■■□□□ 1.33
CXXC1-210ENST00000587396 CWC25Q9NXE8 425 aaPredicted RBP23.34■■□□□ 1.33
CXXC1-210ENST00000587396 MINPP1Q9UNW1 487 aa23.34■■□□□ 1.33
CXXC1-210ENST00000587396 PSME4Q14997 1843 aa23.33■■□□□ 1.33
CXXC1-210ENST00000587396 LDLRAD1Q5T700 205 aa23.33■■□□□ 1.33
CXXC1-210ENST00000587396 MBIPQ9NS73 344 aa23.33■■□□□ 1.33
CXXC1-210ENST00000587396 HTTP42858 3142 aa23.33■■□□□ 1.33
CXXC1-210ENST00000587396 KIAA0825Q8IV33 1275 aa23.32■■□□□ 1.32
CXXC1-210ENST00000587396 MED23Q9ULK4 1368 aa23.31■■□□□ 1.32
CXXC1-210ENST00000587396 STRIP1Q5VSL9 837 aa23.31■■□□□ 1.32
CXXC1-210ENST00000587396 IFNL1Q8IU54 200 aa23.31■■□□□ 1.32
CXXC1-210ENST00000587396 CLMNQ96JQ2 1002 aa23.31■■□□□ 1.32
CXXC1-210ENST00000587396 CENPFP49454 3210 aa23.3■■□□□ 1.32
CXXC1-210ENST00000587396 KLRK1P26718 216 aa23.3■■□□□ 1.32
CXXC1-210ENST00000587396 CCT4P50991 539 aaKnown RBP23.3■■□□□ 1.32
CXXC1-210ENST00000587396 CTSWP56202 376 aa23.3■■□□□ 1.32
CXXC1-210ENST00000587396 SLC10A4Q96EP9 437 aa23.3■■□□□ 1.32
CXXC1-210ENST00000587396 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
CXXC1-210ENST00000587396 GREM2Q9H772 168 aa23.3■■□□□ 1.32
CXXC1-210ENST00000587396 IGF2BP3O00425 579 aaKnown RBP eCLIP23.29■■□□□ 1.32
CXXC1-210ENST00000587396 EN2P19622 333 aaPredicted RBP23.29■■□□□ 1.32
CXXC1-210ENST00000587396 APOBEC3FQ8IUX4 373 aaKnown RBP23.29■■□□□ 1.32
CXXC1-210ENST00000587396 RUNDC1Q96C34 613 aa23.29■■□□□ 1.32
CXXC1-210ENST00000587396 METTL22Q9BUU2 404 aaPredicted RBP23.29■■□□□ 1.32
CXXC1-210ENST00000587396 ALDH1A1P00352 501 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 TTLL11Q8NHH1 800 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 CD99L2Q8TCZ2 262 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 COA1Q9GZY4 146 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 BSDC1Q9NW68 430 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-210ENST00000587396 MYO3BQ8WXR4 1341 aa23.28■■□□□ 1.32
CXXC1-210ENST00000587396 BRCA2P51587 3418 aa23.27■■□□□ 1.32
CXXC1-210ENST00000587396 MANSC4A6NHS7 340 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-210ENST00000587396 DEFB129Q9H1M3 183 aa23.27■■□□□ 1.32
CXXC1-210ENST00000587396 PCDHAC2Q9Y5I4 1007 aa23.27■■□□□ 1.32
CXXC1-210ENST00000587396 GTF2IP78347 998 aa23.26■■□□□ 1.31
CXXC1-210ENST00000587396 CAP1Q01518 475 aa23.26■■□□□ 1.31
CXXC1-210ENST00000587396 INTS3Q68E01 1043 aaKnown RBP23.26■■□□□ 1.31
CXXC1-210ENST00000587396 ZBED3Q96IU2 234 aaPredicted RBP23.26■■□□□ 1.31
CXXC1-210ENST00000587396 WNK4Q96J92 1243 aa23.26■■□□□ 1.31
CXXC1-210ENST00000587396 PTPN22Q9Y2R2 807 aa23.26■■□□□ 1.31
CXXC1-210ENST00000587396 FXR1P51114 621 aaKnown RBP eCLIP23.25■■□□□ 1.31
CXXC1-210ENST00000587396 MAP3K2Q9Y2U5 619 aa23.25■■□□□ 1.31
CXXC1-210ENST00000587396 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
CXXC1-210ENST00000587396 INHBEP58166 350 aa23.24■■□□□ 1.31
CXXC1-210ENST00000587396 ZNF646O15015 1829 aaPredicted RBP23.24■■□□□ 1.31
CXXC1-210ENST00000587396 CRHR2Q13324 411 aa23.23■■□□□ 1.31
CXXC1-210ENST00000587396 RALBP1Q15311 655 aa23.23■■□□□ 1.31
CXXC1-210ENST00000587396 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
CXXC1-210ENST00000587396 ZNF853P0CG23 659 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 GJA5P36382 358 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 WDR43Q15061 677 aaKnown RBP eCLIP23.22■■□□□ 1.312e-7■■■■□ 19.5
CXXC1-210ENST00000587396 C8orf58Q8NAV2 365 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 ERO1AQ96HE7 468 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 LEMD3Q9Y2U8 911 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 ZNF804BA4D1E1 1349 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 SSC5DA1L4H1 1573 aa23.22■■□□□ 1.31
CXXC1-210ENST00000587396 CLRN2A0PK11 232 aa23.21■■□□□ 1.31
CXXC1-210ENST00000587396 F8W031 263 aaPredicted RBP23.21■■□□□ 1.31
CXXC1-210ENST00000587396 SNAP23O00161 211 aa23.21■■□□□ 1.31
CXXC1-210ENST00000587396 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
CXXC1-210ENST00000587396 ZBTB48P10074 688 aaPredicted RBP23.21■■□□□ 1.31
CXXC1-210ENST00000587396 DLGAP5Q15398 846 aa23.21■■□□□ 1.31
CXXC1-210ENST00000587396 CWF19L2Q2TBE0 894 aaKnown RBP23.21■■□□□ 1.31
CXXC1-210ENST00000587396 EFCC1Q9HA90 598 aa23.21■■□□□ 1.31
CXXC1-210ENST00000587396 SPEF2Q9C093 1822 aa23.21■■□□□ 1.31
CXXC1-210ENST00000587396 MAP3K11Q16584 847 aa23.2■■□□□ 1.3
CXXC1-210ENST00000587396 CERS5Q8N5B7 392 aa23.2■■□□□ 1.3
CXXC1-210ENST00000587396 ARMC5Q96C12 935 aa23.2■■□□□ 1.3
CXXC1-210ENST00000587396 PTPN18Q99952 460 aa23.2■■□□□ 1.3
CXXC1-210ENST00000587396 AOX1Q06278 1338 aa23.19■■□□□ 1.3
CXXC1-210ENST00000587396 PI4KAP2A4QPH2 592 aa23.19■■□□□ 1.3
CXXC1-210ENST00000587396 PPP1R12BO60237 982 aaPredicted RBP23.19■■□□□ 1.3
CXXC1-210ENST00000587396 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
CXXC1-210ENST00000587396 NBPF12Q5TAG4 269 aaPredicted RBP23.19■■□□□ 1.3
CXXC1-210ENST00000587396 PI4KAP1Q8N8J0 262 aa23.19■■□□□ 1.3
CXXC1-210ENST00000587396 COLQQ9Y215 455 aaPredicted RBP23.19■■□□□ 1.3
CXXC1-210ENST00000587396 MYCP01106 439 aaPredicted RBP23.18■■□□□ 1.3
CXXC1-210ENST00000587396 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
CXXC1-210ENST00000587396 KIAA0100Q14667 2235 aaKnown RBP23.18■■□□□ 1.3
CXXC1-210ENST00000587396 KCNJ4P48050 445 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 MMP14P50281 582 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 SP3Q02447 781 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 UBE3BQ7Z3V4 1068 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 CD209Q9NNX6 404 aa23.17■■□□□ 1.3
CXXC1-210ENST00000587396 JAG2Q9Y219 1238 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms