RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 USP17L4A6NCW7 530 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 DACT2Q5SW24 774 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 USP17L1Q7RTZ2 530 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 CCDC102AQ96A19 550 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 MED23Q9ULK4 1368 aa25.18■■□□□ 1.62
PTBP1-208ENST00000585956 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
PTBP1-208ENST00000585956 MLLT1Q03111 559 aaPredicted RBP25.17■■□□□ 1.62
PTBP1-208ENST00000585956 BSDC1Q9NW68 430 aaPredicted RBP25.17■■□□□ 1.62
PTBP1-208ENST00000585956 H7C1W4 665 aa25.16■■□□□ 1.62
PTBP1-208ENST00000585956 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
PTBP1-208ENST00000585956 CASP7P55210 303 aa25.16■■□□□ 1.62
PTBP1-208ENST00000585956 UBE3BQ7Z3V4 1068 aa25.16■■□□□ 1.62
PTBP1-208ENST00000585956 CCT4P50991 539 aaKnown RBP25.15■■□□□ 1.62
PTBP1-208ENST00000585956 PODNQ7Z5L7 613 aa25.15■■□□□ 1.62
PTBP1-208ENST00000585956 CDC5LQ99459 802 aaKnown RBP25.15■■□□□ 1.62
PTBP1-208ENST00000585956 SAGE1Q9NXZ1 904 aa25.15■■□□□ 1.62
PTBP1-208ENST00000585956 SNAP23O00161 211 aa25.14■■□□□ 1.62
PTBP1-208ENST00000585956 WWC1Q8IX03 1113 aa25.14■■□□□ 1.62
PTBP1-208ENST00000585956 UBE2Q2LH0YL09 131 aa25.13■■□□□ 1.61
PTBP1-208ENST00000585956 TWISTNBQ3B726 338 aaPredicted RBP25.13■■□□□ 1.61
PTBP1-208ENST00000585956 PITPNM2Q9BZ72 1349 aa25.12■■□□□ 1.61
PTBP1-208ENST00000585956 HTTP42858 3142 aa25.12■■□□□ 1.61
PTBP1-208ENST00000585956 SASH1O94885 1247 aa25.12■■□□□ 1.61
PTBP1-208ENST00000585956 A0A1B0GUL6 1792 aa25.12■■□□□ 1.61
PTBP1-208ENST00000585956 SLC4A2P04920 1241 aa25.11■■□□□ 1.61
PTBP1-208ENST00000585956 GCKRQ14397 625 aa25.11■■□□□ 1.61
PTBP1-208ENST00000585956 FBXW7Q969H0 707 aa25.11■■□□□ 1.61
PTBP1-208ENST00000585956 WNT10BO00744 389 aa25.1■■□□□ 1.61
PTBP1-208ENST00000585956 IRS2Q9Y4H2 1338 aa25.1■■□□□ 1.61
PTBP1-208ENST00000585956 ITGA6P23229 1130 aa25.09■■□□□ 1.61
PTBP1-208ENST00000585956 SOX10P56693 466 aa25.09■■□□□ 1.61
PTBP1-208ENST00000585956 STK31Q9BXU1 1019 aa25.09■■□□□ 1.61
PTBP1-208ENST00000585956 FZD1Q9UP38 647 aa25.09■■□□□ 1.61
PTBP1-208ENST00000585956 PCDHAC2Q9Y5I4 1007 aa25.09■■□□□ 1.61
PTBP1-208ENST00000585956 FLIIQ13045 1269 aa25.08■■□□□ 1.61
PTBP1-208ENST00000585956 CCDC27Q2M243 656 aa25.08■■□□□ 1.61
PTBP1-208ENST00000585956 PLA2G12BQ9BX93 195 aa25.08■■□□□ 1.61
PTBP1-208ENST00000585956 SLC34A2O95436 690 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 CSF1RP07333 972 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 NEXNQ0ZGT2 675 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 MKRN3Q13064 507 aaKnown RBP25.07■■□□□ 1.6
PTBP1-208ENST00000585956 STRIP1Q5VSL9 837 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 COA1Q9GZY4 146 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 ZNF804BA4D1E1 1349 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 FANCIQ9NVI1 1328 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 CENPFP49454 3210 aa25.07■■□□□ 1.6
PTBP1-208ENST00000585956 KIAA0825Q8IV33 1275 aa25.06■■□□□ 1.6
PTBP1-208ENST00000585956 CERS5Q8N5B7 392 aa25.06■■□□□ 1.6
PTBP1-208ENST00000585956 ZBED3Q96IU2 234 aaPredicted RBP25.06■■□□□ 1.6
PTBP1-208ENST00000585956 AOX1Q06278 1338 aa25.06■■□□□ 1.6
PTBP1-208ENST00000585956 FKBP1BP68106 108 aa25.05■■□□□ 1.6
PTBP1-208ENST00000585956 LEMD3Q9Y2U8 911 aa25.05■■□□□ 1.6
PTBP1-208ENST00000585956 MKI67P46013 3256 aaKnown RBP25.04■■□□□ 1.6
PTBP1-208ENST00000585956 TBC1D8O95759 1140 aa25.04■■□□□ 1.6
PTBP1-208ENST00000585956 IGHMBP2P38935 993 aaKnown RBP25.04■■□□□ 1.6
PTBP1-208ENST00000585956 GTF2IP78347 998 aa25.04■■□□□ 1.6
PTBP1-208ENST00000585956 CHRNDQ07001 517 aa25.04■■□□□ 1.6
PTBP1-208ENST00000585956 PRKG1Q13976 671 aa25.04■■□□□ 1.6
PTBP1-208ENST00000585956 HELBQ8NG08 1087 aaPredicted RBP25.04■■□□□ 1.6
PTBP1-208ENST00000585956 R3HDMLQ9H3Y0 253 aa25.04■■□□□ 1.6
PTBP1-208ENST00000585956 SPINK5Q9NQ38 1064 aaPredicted RBP25.04■■□□□ 1.6
PTBP1-208ENST00000585956 SSC5DA1L4H1 1573 aa25.03■■□□□ 1.6
PTBP1-208ENST00000585956 TAF5LO75529 589 aa25.03■■□□□ 1.6
PTBP1-208ENST00000585956 FOXO4P98177 505 aa25.03■■□□□ 1.6
PTBP1-208ENST00000585956 PTPN12Q05209 780 aaKnown RBP25.03■■□□□ 1.6
PTBP1-208ENST00000585956 TTLL5Q6EMB2 1281 aa25.03■■□□□ 1.6
PTBP1-208ENST00000585956 DNAAF4Q8WXU2 420 aa25.03■■□□□ 1.6
PTBP1-208ENST00000585956 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
PTBP1-208ENST00000585956 PDE4DIPQ5VU43 2346 aa25.02■■□□□ 1.6
PTBP1-208ENST00000585956 F6X3S4 739 aa25.02■■□□□ 1.6
PTBP1-208ENST00000585956 VAMP4O75379 141 aa25.02■■□□□ 1.6
PTBP1-208ENST00000585956 FKBP5Q13451 457 aaPredicted RBP25.02■■□□□ 1.6
PTBP1-208ENST00000585956 EPHA10Q5JZY3 1008 aa25.02■■□□□ 1.6
PTBP1-208ENST00000585956 CTU1Q7Z7A3 348 aaKnown RBP25.01■■□□□ 1.59
PTBP1-208ENST00000585956 CD209Q9NNX6 404 aa25.01■■□□□ 1.59
PTBP1-208ENST00000585956 IL16Q14005 1332 aa25.01■■□□□ 1.59
PTBP1-208ENST00000585956 BRCA2P51587 3418 aa25.01■■□□□ 1.59
PTBP1-208ENST00000585956 TTLL12Q14166 644 aaPredicted RBP25■■□□□ 1.59
PTBP1-208ENST00000585956 OGFOD1Q8N543 542 aa25■■□□□ 1.59
PTBP1-208ENST00000585956 LINS1Q8NG48 757 aa25■■□□□ 1.59
PTBP1-208ENST00000585956 ZNF296Q8WUU4 475 aaPredicted RBP25■■□□□ 1.59
PTBP1-208ENST00000585956 JAG2Q9Y219 1238 aa25■■□□□ 1.59
PTBP1-208ENST00000585956 EXOSC9Q06265 439 aaKnown RBP24.99■■□□□ 1.59
PTBP1-208ENST00000585956 MYO3BQ8WXR4 1341 aa24.99■■□□□ 1.59
PTBP1-208ENST00000585956 MPHOSPH8Q99549 860 aa24.99■■□□□ 1.59
PTBP1-208ENST00000585956 CHMP4AQ9BY43 222 aa24.99■■□□□ 1.59
PTBP1-208ENST00000585956 ZNF594Q96JF6 807 aaPredicted RBP24.98■■□□□ 1.59
PTBP1-208ENST00000585956 ANKRD2Q9GZV1 360 aa24.98■■□□□ 1.59
PTBP1-208ENST00000585956 CACNA1FO60840 1977 aa24.98■■□□□ 1.59
PTBP1-208ENST00000585956 TM4SF4P48230 202 aa24.97■■□□□ 1.59
PTBP1-208ENST00000585956 BEND3Q5T5X7 828 aa24.97■■□□□ 1.59
PTBP1-208ENST00000585956 HPS5Q9UPZ3 1129 aa24.97■■□□□ 1.59
PTBP1-208ENST00000585956 LDLRAD1Q5T700 205 aa24.96■■□□□ 1.59
PTBP1-208ENST00000585956 ECM29Q5VYK3 1845 aa24.96■■□□□ 1.59
PTBP1-208ENST00000585956 F8W031 263 aaPredicted RBP24.95■■□□□ 1.58
PTBP1-208ENST00000585956 REM2Q8IYK8 340 aaPredicted RBP24.95■■□□□ 1.58
PTBP1-208ENST00000585956 MYH16Q9H6N6 1097 aa24.95■■□□□ 1.58
PTBP1-208ENST00000585956 ANKRD18BA2A2Z9 1011 aa24.94■■□□□ 1.58
PTBP1-208ENST00000585956 KCNJ4P48050 445 aa24.94■■□□□ 1.58
PTBP1-208ENST00000585956 CLMNQ96JQ2 1002 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms