RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 CPB1P15086 417 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 ALAS2P22557 587 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 SIK1P57059 783 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 ENOX2Q16206 610 aaKnown RBP4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 FAM35AQ86V20 835 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 SALL4Q9UJQ4 1053 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 STARD13Q9Y3M8 1113 aa4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 CCDC9Q9Y3X0 531 aaKnown RBP4.36□□□□□ -1.71
RPRD1A-204ENST00000585953 PNMA6FA0A0J9YX94 578 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 POLR3DP05423 398 aaPredicted RBP4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 EIF2AK2P19525 551 aaKnown RBP4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 MAPK8P45983 427 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 COL19A1Q14993 1142 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 CHSY3Q70JA7 882 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 NCAPG2Q86XI2 1143 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 LRP8Q14114 963 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 PERM1Q5SV97 790 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 GALNT12Q8IXK2 581 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 CEP120Q8N960 986 aa4.35□□□□□ -1.71
RPRD1A-204ENST00000585953 DYRK3O43781 588 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 GHRHP01286 108 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 ALBP02768 609 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 SPATA31C1P0DKV0 1188 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 ACPPP15309 386 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 PSAPL1Q6NUJ1 521 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 SETDB2Q96T68 719 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 LPIN3Q9BQK8 851 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 LATS2Q9NRM7 1088 aa4.34□□□□□ -1.71
RPRD1A-204ENST00000585953 EDN3P14138 238 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 ATP11AP98196 1134 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 LCE1DQ5T752 114 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 PEAR1Q5VY43 1037 aaPredicted RBP4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 C20orf204Q6ZNR8 217 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 FBXO33Q7Z6M2 555 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 CCDC74AQ96AQ1 378 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 SPACA7Q96KW9 195 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 NPHS2Q9NP85 383 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 FRRS1LQ9P0K9 344 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 WWC3Q9ULE0 1092 aa4.34□□□□□ -1.72
RPRD1A-204ENST00000585953 LDHBP07195 334 aaKnown RBP4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 EAPPQ56P03 285 aaPredicted RBP4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 ELMSAN1Q6PJG2 1045 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 RGS22Q8NE09 1264 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 PLD4Q96BZ4 506 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 SMG9Q9H0W8 520 aaKnown RBP4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 RBSNQ9H1K0 784 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 RASSF4Q9H2L5 321 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 M0R082 166 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 ATP2B2Q01814 1243 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 MICALL1Q8N3F8 863 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 ZNF417Q8TAU3 575 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 EPS8L3Q8TE67 593 aaKnown RBP4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 FBF1Q8TES7 1133 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 NUDT8Q8WV74 236 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 ZNF587Q96SQ5 575 aaPredicted RBP4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 ZKSCAN3Q9BRR0 538 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 PBX4Q9BYU1 374 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 DZANK1Q9NVP4 752 aa4.33□□□□□ -1.72
RPRD1A-204ENST00000585953 A0A1W2PP55 124 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 NFKBIEO00221 500 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 TRPA1O75762 1119 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 RGS9O75916 674 aaPredicted RBP4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 ALG1LQ6GMV1 187 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 PI16Q6UXB8 463 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 C8orf86Q6ZUL3 223 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 HHIPQ96QV1 700 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 OSMRQ99650 979 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 JPH1Q9HDC5 661 aaPredicted RBP4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 COBLO75128 1261 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 PRPF40AO75400 957 aaKnown RBP4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 PRSS36Q5K4E3 855 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 TTC9Q92623 222 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 BCL2L13Q9BXK5 485 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 PRDM6Q9NQX0 595 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 TPSG1Q9NRR2 321 aa4.32□□□□□ -1.72
RPRD1A-204ENST00000585953 LILRB5O75023 590 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 SMNDC1O75940 238 aaKnown RBP eCLIP4.31□□□□□ -1.726e-12■■■■■ 51.5
RPRD1A-204ENST00000585953 AFF1P51825 1210 aaKnown RBP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 TAGLNQ01995 201 aaKnown RBP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 GRIK5Q16478 980 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 KIAA0319Q5VV43 1072 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 CEP135Q66GS9 1140 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 TRIM33Q9UPN9 1127 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 SPDYE3A6NKU9 549 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 YBX3P16989 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 TXKP42681 527 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 COL9A3Q14050 684 aaPredicted RBP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 ADAMTSL4Q6UY14 1074 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 TMEM102Q8N9M5 508 aaPredicted RBP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 POP1Q99575 1024 aaKnown RBP4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 NLRP2Q9NX02 1062 aa4.31□□□□□ -1.72
RPRD1A-204ENST00000585953 PDE2AO00408 941 aaPredicted RBP4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 GADD45BO75293 160 aaPredicted RBP4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 FGD1P98174 961 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 GIPC2Q8TF65 315 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 NXPE3Q969Y0 559 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 TCF12Q99081 682 aa4.3□□□□□ -1.72
RPRD1A-204ENST00000585953 DUSP9Q99956 384 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms