RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 TAF5LO75529 589 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ADORA1P30542 326 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CHRNDQ07001 517 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 BSDC1Q9NW68 430 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PARP3Q9Y6F1 533 aa17.99■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CHMLP26374 656 aa17.98■□□□□ 0.47
CDK5RAP3-236ENST00000584991 RRAGDQ9NQL2 400 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CUL4AQ13619 759 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 A0A1B0GUL6 1792 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CCDC173Q0VFZ6 552 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PUM3Q15397 648 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 LMBRD1Q9NUN5 540 aa17.97■□□□□ 0.47
CDK5RAP3-236ENST00000584991 SNAP23O00161 211 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 FGFR2P21802 821 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CRY2Q49AN0 593 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 GAS2L3Q86XJ1 694 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
CDK5RAP3-236ENST00000584991 CCDC158Q5M9N0 1113 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 LPIN2Q92539 896 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 NEK4P51957 841 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 GRAPQ13588 217 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 GRAPLQ8TC17 118 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 DNAJC2Q99543 621 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-236ENST00000584991 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 SLC5A1P13866 664 aa17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 MCTP1Q6DN14 999 aa17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 EDC3Q96F86 508 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 HAUS7Q99871 368 aa17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
CDK5RAP3-236ENST00000584991 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-236ENST00000584991 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-236ENST00000584991 TMX3Q96JJ7 454 aa17.92■□□□□ 0.46
CDK5RAP3-236ENST00000584991 ESPNB1AK53 854 aa17.92■□□□□ 0.46
CDK5RAP3-236ENST00000584991 MBD3O95983 291 aa17.92■□□□□ 0.46
CDK5RAP3-236ENST00000584991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-236ENST00000584991 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-236ENST00000584991 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-236ENST00000584991 NASPP49321 788 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-236ENST00000584991 HS1BP3Q53T59 392 aa17.91■□□□□ 0.46
CDK5RAP3-236ENST00000584991 KLHL34Q8N239 644 aa17.91■□□□□ 0.46
CDK5RAP3-236ENST00000584991 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 ZDHHC9Q9Y397 364 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 HSPA4P34932 840 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 PDE6BP35913 854 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 PHKA1P46020 1223 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 SCARF1Q14162 830 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 ZGPATQ8N5A5 531 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 PAG1Q9NWQ8 432 aa17.9■□□□□ 0.46
CDK5RAP3-236ENST00000584991 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.46
CDK5RAP3-236ENST00000584991 GOLIM4O00461 696 aa17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 BRD1O95696 1058 aa17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 FKBP4Q02790 459 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ANO2Q9NQ90 1003 aa17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.45
CDK5RAP3-236ENST00000584991 SRGNP10124 158 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ZSCAN23Q3MJ62 389 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 SLC16A10Q8TF71 515 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 BBOX1O75936 387 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 MCAMP43121 646 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 KCNJ4P48050 445 aa17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 CWC27Q6UX04 472 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-236ENST00000584991 UQCRFS1P1P0C7P4 283 aa17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ARID4AP29374 1257 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ZAP70P43403 619 aa17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 BCAMP50895 628 aa17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PI16Q6UXB8 463 aa17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 IL25Q9H293 177 aa17.87■□□□□ 0.45
CDK5RAP3-236ENST00000584991 HIP1O00291 1037 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 NPR1P16066 1061 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PKP1Q13835 747 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ANKIB1Q9P2G1 1089 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 SGSM2O43147 1006 aa17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 PRPF40AO75400 957 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 CAVIN1Q6NZI2 390 aaKnown RBP17.86■□□□□ 0.45
CDK5RAP3-236ENST00000584991 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
CDK5RAP3-236ENST00000584991 RAD50Q92878 1312 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms