RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 ZNF428Q96B54 188 aa10.93□□□□□ -0.66
SRSF1-207ENST00000584668 CWC25Q9NXE8 425 aaPredicted RBP10.93□□□□□ -0.66
SRSF1-207ENST00000584668 TRIM17Q9Y577 477 aa10.93□□□□□ -0.66
SRSF1-207ENST00000584668 COL4A1P02462 1669 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 MYO1BO43795 1136 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 PCCAP05165 728 aaPredicted RBP10.92□□□□□ -0.66
SRSF1-207ENST00000584668 ZBTB48P10074 688 aaPredicted RBP10.92□□□□□ -0.66
SRSF1-207ENST00000584668 ARHGEF6Q15052 776 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 HABP4Q5JVS0 413 aaKnown RBP10.92□□□□□ -0.66
SRSF1-207ENST00000584668 STRIP1Q5VSL9 837 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 MOB2Q70IA6 237 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 GMLQ99445 158 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 PPP2R3BQ9Y5P8 575 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 BRCA2P51587 3418 aa10.92□□□□□ -0.66
SRSF1-207ENST00000584668 HTTP42858 3142 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 UNCXA6NJT0 531 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 WNT10BO00744 389 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 PPP1R12BO60237 982 aaPredicted RBP10.91□□□□□ -0.66
SRSF1-207ENST00000584668 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
SRSF1-207ENST00000584668 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
SRSF1-207ENST00000584668 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 NBPF9Q3BBW0 867 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 SPRYD7Q5W111 196 aa10.91□□□□□ -0.66
SRSF1-207ENST00000584668 ANGEL1Q9UNK9 670 aaKnown RBP10.91□□□□□ -0.66
SRSF1-207ENST00000584668 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
SRSF1-207ENST00000584668 IGHMBP2P38935 993 aaKnown RBP10.9□□□□□ -0.66
SRSF1-207ENST00000584668 KRT24Q2M2I5 525 aa10.9□□□□□ -0.66
SRSF1-207ENST00000584668 DUSP27Q5VZP5 1158 aa10.9□□□□□ -0.66
SRSF1-207ENST00000584668 SLC10A4Q96EP9 437 aa10.9□□□□□ -0.66
SRSF1-207ENST00000584668 MYD88Q99836 296 aa10.9□□□□□ -0.66
SRSF1-207ENST00000584668 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
SRSF1-207ENST00000584668 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
SRSF1-207ENST00000584668 SASH1O94885 1247 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 KCNJ4P48050 445 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 CTSWP56202 376 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
SRSF1-207ENST00000584668 NEXNQ0ZGT2 675 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 PRKG1Q13976 671 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 DACT2Q5SW24 774 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 PRAMEF18Q5VWM3 479 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 OTOP1Q7RTM1 612 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 NBPF11Q86T75 865 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 IFNL1Q8IU54 200 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 CCDC85AQ96PX6 553 aaPredicted RBP10.89□□□□□ -0.67
SRSF1-207ENST00000584668 BSDC1Q9NW68 430 aaPredicted RBP10.89□□□□□ -0.67
SRSF1-207ENST00000584668 LEMD3Q9Y2U8 911 aa10.89□□□□□ -0.67
SRSF1-207ENST00000584668 IREB2P48200 963 aaKnown RBP10.88□□□□□ -0.67
SRSF1-207ENST00000584668 CCT4P50991 539 aaKnown RBP10.88□□□□□ -0.67
SRSF1-207ENST00000584668 SUPT20HL1Q3ZLR7 823 aa10.88□□□□□ -0.67
SRSF1-207ENST00000584668 TTLL5Q6EMB2 1281 aa10.88□□□□□ -0.67
SRSF1-207ENST00000584668 ANKRD2Q9GZV1 360 aa10.88□□□□□ -0.67
SRSF1-207ENST00000584668 EFCC1Q9HA90 598 aa10.88□□□□□ -0.67
SRSF1-207ENST00000584668 SCAF8Q9UPN6 1271 aaKnown RBP10.88□□□□□ -0.67
SRSF1-207ENST00000584668 KIAA0100Q14667 2235 aaKnown RBP10.87□□□□□ -0.67
SRSF1-207ENST00000584668 DLGAP5Q15398 846 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 LDLRAD1Q5T700 205 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 KIAA0825Q8IV33 1275 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 CCDC146Q8IYE0 955 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 WNK4Q96J92 1243 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 MPHOSPH8Q99549 860 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 METTL22Q9BUU2 404 aaPredicted RBP10.87□□□□□ -0.67
SRSF1-207ENST00000584668 DEFB129Q9H1M3 183 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 PTPN22Q9Y2R2 807 aa10.87□□□□□ -0.67
SRSF1-207ENST00000584668 GNAI1P63096 354 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 SP3Q02447 781 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 TNFAIP1Q13829 316 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 MAP3K11Q16584 847 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 MINPP1Q9UNW1 487 aa10.86□□□□□ -0.67
SRSF1-207ENST00000584668 ZNF804BA4D1E1 1349 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
SRSF1-207ENST00000584668 POTEFA5A3E0 1075 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 SLC4A8Q2Y0W8 1093 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 ANKRD13AQ8IZ07 590 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 STK31Q9BXU1 1019 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 MBIPQ9NS73 344 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 IFT57Q9NWB7 429 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.85□□□□□ -0.67
SRSF1-207ENST00000584668 OTOFQ9HC10 1997 aa10.85□□□□□ -0.67
SRSF1-207ENST00000584668 FXR1P51114 621 aaKnown RBP eCLIP10.84□□□□□ -0.67
SRSF1-207ENST00000584668 GTF2IP78347 998 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 CRHR2Q13324 411 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 KIF22Q14807 665 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 MXD3Q9BW11 206 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 GREM2Q9H772 168 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 PHAXQ9H814 394 aaKnown RBP10.84□□□□□ -0.67
SRSF1-207ENST00000584668 VEZTQ9HBM0 779 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 MAP3K2Q9Y2U5 619 aa10.84□□□□□ -0.67
SRSF1-207ENST00000584668 IGF2BP3O00425 579 aaKnown RBP eCLIP10.83□□□□□ -0.68
SRSF1-207ENST00000584668 ZNF804AQ7Z570 1209 aa10.83□□□□□ -0.68
SRSF1-207ENST00000584668 TTLL11Q8NHH1 800 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms