RNA–Protein interactions for RNA: ENST00000584592.5

CDK5RAP3-235, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-235ENST00000584592 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-235ENST00000584592 CCDC93Q567U6 631 aa13.85□□□□□ -0.19
CDK5RAP3-235ENST00000584592 C3orf67Q6ZVT6 689 aa13.85□□□□□ -0.19
CDK5RAP3-235ENST00000584592 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
CDK5RAP3-235ENST00000584592 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
CDK5RAP3-235ENST00000584592 GREM2Q9H772 168 aa13.84□□□□□ -0.19
CDK5RAP3-235ENST00000584592 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 IGHDP01880 384 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ITGA6P23229 1130 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SCNN1DP51172 638 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 IFIT5Q13325 482 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 PKN2Q16513 984 aaKnown RBP13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CCDC57Q2TAC2 916 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 MASTLQ96GX5 879 aa13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
CDK5RAP3-235ENST00000584592 NPHP1O15259 732 aa13.82□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CIAO1O76071 339 aa13.82□□□□□ -0.2
CDK5RAP3-235ENST00000584592 NPR1P16066 1061 aa13.82□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 BBOX1O75936 387 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ALDH1B1P30837 517 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 IARSP41252 1262 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 EPS15P42566 896 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CCDC24Q8N4L8 307 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RIPOR2Q9Y4F9 1068 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RPS8P62241 208 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 GRAPQ13588 217 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 DDX46Q7L014 1031 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 TMC4Q7Z404 712 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RBM17Q96I25 401 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RNF186Q9NXI6 227 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SNED1Q8TER0 1413 aa13.8□□□□□ -0.2
CDK5RAP3-235ENST00000584592 FAM155AB1AL88 458 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-235ENST00000584592 EYA2O00167 538 aa13.79□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CENPQQ7L2Z9 268 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ATG9AQ7Z3C6 839 aa13.79□□□□□ -0.2
CDK5RAP3-235ENST00000584592 CCDC136Q96JN2 1154 aa13.79□□□□□ -0.2
CDK5RAP3-235ENST00000584592 SURF6O75683 361 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 IL15P40933 162 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 LDHAL6AQ6ZMR3 332 aa13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 ANKRD18AQ8IVF6 992 aa13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 AKAP11Q9UKA4 1901 aa13.78□□□□□ -0.2
CDK5RAP3-235ENST00000584592 TRPA1O75762 1119 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 SASH1O94885 1247 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 IGHMBP2P38935 993 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ERC1Q8IUD2 1116 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 JDP2Q8WYK2 163 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PSMD1Q99460 953 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 GPR108Q9NPR9 543 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 CHMP3Q9Y3E7 222 aa13.77□□□□□ -0.21
CDK5RAP3-235ENST00000584592 COL4A5P29400 1685 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 COL6A3P12111 3177 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 VGLL2Q8N8G2 317 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 KLHDC4Q8TBB5 520 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 KIF1BPQ96EK5 621 aa13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ZNF594Q96JF6 807 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 GLIS2Q9BZE0 524 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ZBTB22O15209 634 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 NUCB1Q02818 461 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 GRIPAP1Q4V328 841 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 CCDC85AQ96PX6 553 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 MPHOSPH8Q99549 860 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PUS3Q9BZE2 481 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PODXL2Q9NZ53 605 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 GJA3Q9Y6H8 435 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
CDK5RAP3-235ENST00000584592 PDE8BO95263 885 aa13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 HUNKP57058 714 aa13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 KIF23Q02241 960 aaPredicted RBP13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 TAF7LQ5H9L4 462 aa13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 CC2D2BQ6DHV5 1058 aa13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 ZC3H15Q8WU90 426 aaKnown RBP13.74□□□□□ -0.21
CDK5RAP3-235ENST00000584592 CCDC102AQ96A19 550 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms