RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 LDHAL6AQ6ZMR3 332 aa12.46□□□□□ -0.41
SKA2-208ENST00000583927 USP17L1Q7RTZ2 530 aa12.46□□□□□ -0.41
SKA2-208ENST00000583927 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
SKA2-208ENST00000583927 ZBED9Q6R2W3 1325 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 WTIPA6NIX2 430 aaPredicted RBP12.45□□□□□ -0.42
SKA2-208ENST00000583927 STRIP1Q5VSL9 837 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
SKA2-208ENST00000583927 CNTNAP1P78357 1384 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
SKA2-208ENST00000583927 UBE4AQ14139 1066 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 TAF7LQ5H9L4 462 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 DACT2Q5SW24 774 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
SKA2-208ENST00000583927 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 TRPM4Q8TD43 1214 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 RIPOR2Q9Y4F9 1068 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 THSD7BQ9C0I4 1608 aa12.44□□□□□ -0.42
SKA2-208ENST00000583927 MROH5Q6ZUA9 1318 aa12.43□□□□□ -0.42
SKA2-208ENST00000583927 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
SKA2-208ENST00000583927 KCNJ4P48050 445 aa12.43□□□□□ -0.42
SKA2-208ENST00000583927 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
SKA2-208ENST00000583927 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
SKA2-208ENST00000583927 SHTN1A0MZ66 631 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 RASSF10A6NK89 507 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 TAF5LO75529 589 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 IL1R1P14778 569 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 FKBP1AP62942 108 aaKnown RBP12.42□□□□□ -0.42
SKA2-208ENST00000583927 CDC37L1Q7L3B6 337 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 SAMD7Q7Z3H4 446 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
SKA2-208ENST00000583927 PITPNM2Q9BZ72 1349 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 EGFRP00533 1210 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 KLRK1P26718 216 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 KIF4BQ2VIQ3 1234 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 CST9Q5W186 159 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 TTLL5Q6EMB2 1281 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 ZNF804AQ7Z570 1209 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 VGLL2Q8N8G2 317 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
SKA2-208ENST00000583927 SNAP23O00161 211 aa12.4□□□□□ -0.42
SKA2-208ENST00000583927 UBTFL1P0CB47 393 aaPredicted RBP12.4□□□□□ -0.42
SKA2-208ENST00000583927 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
SKA2-208ENST00000583927 TBC1D10BQ4KMP7 808 aaPredicted RBP12.4□□□□□ -0.42
SKA2-208ENST00000583927 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
SKA2-208ENST00000583927 HELBQ8NG08 1087 aaPredicted RBP12.4□□□□□ -0.42
SKA2-208ENST00000583927 PUS3Q9BZE2 481 aaKnown RBP12.4□□□□□ -0.42
SKA2-208ENST00000583927 MYOZ2Q9NPC6 264 aa12.4□□□□□ -0.42
SKA2-208ENST00000583927 PDE8BO95263 885 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 GNAI3P08754 354 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 TRIM27P14373 513 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
SKA2-208ENST00000583927 DEFB115Q30KQ5 88 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 OGFOD1Q8N543 542 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 GLIS2Q9BZE0 524 aaPredicted RBP12.39□□□□□ -0.43
SKA2-208ENST00000583927 TLL2Q9Y6L7 1015 aa12.39□□□□□ -0.43
SKA2-208ENST00000583927 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 TRAF5O00463 557 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 ZBTB22O15209 634 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 BCAR3O75815 825 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 SASH1O94885 1247 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 GTF2IP78347 998 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 MTX1Q13505 466 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 LRRC24Q50LG9 513 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 MTMR14Q8NCE2 650 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 TDRD7Q8NHU6 1098 aaKnown RBP12.38□□□□□ -0.43
SKA2-208ENST00000583927 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
SKA2-208ENST00000583927 FAM84BQ96KN1 310 aaPredicted RBP12.38□□□□□ -0.43
SKA2-208ENST00000583927 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
SKA2-208ENST00000583927 EYA2O00167 538 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 CIAO1O76071 339 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 FGFR2P21802 821 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 HIBADHP31937 336 aaKnown RBP12.37□□□□□ -0.43
SKA2-208ENST00000583927 SCARF1Q14162 830 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 FBXO33Q7Z6M2 555 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 ZBED3Q96IU2 234 aaPredicted RBP12.37□□□□□ -0.43
SKA2-208ENST00000583927 MEIS3Q99687 375 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 COPRSQ9NQ92 184 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
SKA2-208ENST00000583927 PAPPA2Q9BXP8 1791 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 AKAP11Q9UKA4 1901 aa12.37□□□□□ -0.43
SKA2-208ENST00000583927 WNT10BO00744 389 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 PLIN1O60240 522 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 CELF2O95319 508 aaKnown RBP12.36□□□□□ -0.43
SKA2-208ENST00000583927 VEGFBP49765 207 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.43
SKA2-208ENST00000583927 RBM26Q5T8P6 1007 aaKnown RBP12.36□□□□□ -0.43
SKA2-208ENST00000583927 ZKSCAN2Q63HK3 967 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 ATG9AQ7Z3C6 839 aa12.36□□□□□ -0.43
SKA2-208ENST00000583927 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms