RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 LAMB1P07942 1786 aa9.27□□□□□ -0.93
PPP4R1-226ENST00000583903 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 MTFR1Q15390 333 aa9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 MAP3K11Q16584 847 aa9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 NKX2-3Q8TAU0 364 aa9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 ZC3H12CQ9C0D7 883 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 FZD1Q9UP38 647 aa9.26□□□□□ -0.93
PPP4R1-226ENST00000583903 WNT10BO00744 389 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 ANP32CO43423 234 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 MYL6BP14649 208 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 BMP8BP34820 402 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 GJA8P48165 433 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 LRIT3Q3SXY7 679 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 CELF1Q92879 486 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 PHACTR3Q96KR7 559 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 GDF15Q99988 308 aa9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 ZNF646O15015 1829 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-226ENST00000583903 LAMB4A4D0S4 1761 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 MUC3AQ02505 3323 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 EVI5O60447 810 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 GJB1P08034 283 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 GJA5P36382 358 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 PLA2G5P39877 138 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 RALBP1Q15311 655 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 MCM10Q7L590 875 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 PODXL2Q9NZ53 605 aa9.24□□□□□ -0.93
PPP4R1-226ENST00000583903 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 UNCXA6NJT0 531 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 G3V3G9 751 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 NLRP10Q86W26 655 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 RAPGEFL1Q9UHV5 662 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 RPTORQ8N122 1335 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 MYBBP1AQ9BQG0 1328 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 COL4A1P02462 1669 aa9.23□□□□□ -0.93
PPP4R1-226ENST00000583903 COL3A1P02461 1466 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 PSME4Q14997 1843 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 PRUNE2Q8WUY3 3088 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 FARP2O94887 1054 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 GNRH1P01148 92 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 BCAMP50895 628 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 PRMT2P55345 433 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 SF3B3Q15393 1217 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 TAF7Q15545 349 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 LRP10Q7Z4F1 713 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 APOBEC3FQ8IUX4 373 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 ARHGAP39Q9C0H5 1083 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 MIS18AQ9NYP9 233 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 TRMT112Q9UI30 125 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 SH3TC1Q8TE82 1336 aa9.22□□□□□ -0.93
PPP4R1-226ENST00000583903 SSC5DA1L4H1 1573 aa9.21□□□□□ -0.93
PPP4R1-226ENST00000583903 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 UFL1O94874 794 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 SASH1O94885 1247 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 CCL5P13501 91 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 LACTBP83111 547 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 DCTN1Q14203 1278 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 TAF1CQ15572 869 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 OGFOD1Q8N543 542 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 GUCD1Q96NT3 240 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 ZFYVE28Q9HCC9 887 aa9.21□□□□□ -0.94
PPP4R1-226ENST00000583903 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 RPS8P62241 208 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 KIF22Q14807 665 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 PODNQ7Z5L7 613 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 U2AF1L4Q8WU68 220 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 BRI3BPQ8WY22 251 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 FAM122AQ96E09 287 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 RNF208Q9H0X6 261 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 DEFB129Q9H1M3 183 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 GGA1Q9UJY5 639 aa9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 COL1A1P02452 1464 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-226ENST00000583903 HTATSF1O43719 755 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 GRK4P32298 578 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 MMP14P50281 582 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 EIF4A1P60842 406 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 PDIA6Q15084 440 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 HSP90AB3PQ58FF7 597 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 DACT2Q5SW24 774 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 FAM109BQ6ICB4 259 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 TDHQ8IZJ6 230 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 THUMPD2Q9BTF0 503 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 MXD3Q9BW11 206 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 RSPH6AQ9H0K4 717 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 ZSWIM8A7E2V4 1837 aa9.19□□□□□ -0.94
PPP4R1-226ENST00000583903 POTEB2H3BUK9 544 aa9.18□□□□□ -0.94
PPP4R1-226ENST00000583903 CCER2I3L3R5 266 aa9.18□□□□□ -0.94
PPP4R1-226ENST00000583903 TLR2O60603 784 aa9.18□□□□□ -0.94
PPP4R1-226ENST00000583903 USP2O75604 605 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms