RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 RAD21O60216 631 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 BCAR3O75815 825 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 BBOX1O75936 387 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 TRIM27P14373 513 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 PRELPP51888 382 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 FKBP4Q02790 459 aaKnown RBP eCLIP7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 GSE1Q14687 1217 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 OLFM4Q6UX06 510 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 ATF7IPQ6VMQ6 1270 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 RTKN2Q8IZC4 609 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 TTLL11Q8NHH1 800 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 GREM2Q9H772 168 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 GEMIN8Q9NWZ8 242 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 C9orf78Q9NZ63 289 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 RNF181Q9P0P0 153 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 FER1L6Q2WGJ9 1857 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 LTBP1Q14766 1721 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 TIAM2Q8IVF5 1701 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 NBPF7P0C2Y1 421 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 DNTTIP2Q5QJE6 756 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 C9orf131Q5VYM1 1079 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 SP8Q8IXZ3 490 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 CELF1Q92879 486 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 CDC5LQ99459 802 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 TMX4Q9H1E5 349 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 SEC31BQ9NQW1 1179 aa7.47□□□□□ -1.21
PPP4R1-223ENST00000582933 CSF1RP07333 972 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 RPS8P62241 208 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 FOXO4P98177 505 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 DMTNQ08495 405 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 RABL6Q3YEC7 729 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 EPHA10Q5JZY3 1008 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 ZKSCAN2Q63HK3 967 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 INTS3Q68E01 1043 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 MTERF4Q7Z6M4 381 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 KCTD17Q8N5Z5 321 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 ZNF784Q8NCA9 323 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 FRAT1Q92837 279 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 SUCLG2Q96I99 432 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 CCDC85AQ96PX6 553 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 RTFDC1Q9BY42 306 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 USP44Q9H0E7 712 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 COL4A5P29400 1685 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 CACNA1SQ13698 1873 aa7.46□□□□□ -1.22
PPP4R1-223ENST00000582933 CHD4Q14839 1912 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 POTEB2H3BUK9 544 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 ITGA6P23229 1130 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 IARSP41252 1262 aaKnown RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 DPP8Q6V1X1 898 aaPredicted RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 ANKRD18AQ8IVF6 992 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 ANKRD44Q8N8A2 993 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 DDRGK1Q96HY6 314 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 KAZALD1Q96I82 304 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 DCBLD2Q96PD2 775 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 BICC1Q9H694 974 aaKnown RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 ZNF277Q9NRM2 450 aaPredicted RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 BSDC1Q9NW68 430 aaPredicted RBP7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 RCAN3Q9UKA8 241 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 TNNQ9UQP3 1299 aa7.45□□□□□ -1.22
PPP4R1-223ENST00000582933 ANKRD18BA2A2Z9 1011 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 UBTFL1P0CB47 393 aaPredicted RBP7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 CLCN1P35523 988 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 IGHMBP2P38935 993 aaKnown RBP7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 GPSM2P81274 684 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 IFIT5Q13325 482 aaKnown RBP7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 LMBR1LQ6UX01 489 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 TSHZ1Q6ZSZ6 1077 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 MPNDQ8N594 471 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 OTUD6BQ8N6M0 293 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 SUPT20HQ8NEM7 779 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 MEIS3Q99687 375 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 GTPBP4Q9BZE4 634 aaKnown RBP7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 VPS33BQ9H267 617 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 CHMP3Q9Y3E7 222 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 XDHP47989 1333 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 MYH3P11055 1940 aa7.44□□□□□ -1.22
PPP4R1-223ENST00000582933 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 PPIP5K2O43314 1243 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 NRDCO43847 1150 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 UFL1O94874 794 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 LETM1O95202 739 aaPredicted RBP7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 GNAI3P08754 354 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 RLBP1P12271 317 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 KIAA2012Q0VF49 1180 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 AOC3Q16853 763 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 CCDC57Q2TAC2 916 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 LCE2DQ5TA82 110 aaPredicted RBP7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 TMEM57Q8N5G2 664 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 IPO9Q96P70 1041 aaKnown RBP7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 KDM2BQ8NHM5 1336 aa7.43□□□□□ -1.22
PPP4R1-223ENST00000582933 KDM4AO75164 1064 aa7.42□□□□□ -1.22
PPP4R1-223ENST00000582933 MTX1Q13505 466 aa7.42□□□□□ -1.22
PPP4R1-223ENST00000582933 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms