RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
CDK5RAP3-221ENST00000581662 WASHC2AQ641Q2 1341 aa10.78□□□□□ -0.68
CDK5RAP3-221ENST00000581662 NPC1L1Q9UHC9 1359 aa10.77□□□□□ -0.68
CDK5RAP3-221ENST00000581662 A0A087WZG4 1122 aa10.77□□□□□ -0.69
CDK5RAP3-221ENST00000581662 LARGE2Q8N3Y3 721 aa10.77□□□□□ -0.69
CDK5RAP3-221ENST00000581662 STXBP5LQ9Y2K9 1186 aa10.77□□□□□ -0.69
CDK5RAP3-221ENST00000581662 RCCD1A6NED2 376 aa10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 FKTNO75072 461 aa10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 CANXP27824 592 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ZNF530Q6P9A1 599 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 SETDB2Q96T68 719 aa10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ST20-MTHFSA0A0A6YYL1 179 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 A0A1W2PPC1 479 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PLA2G5P39877 138 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 MTHFSP49914 203 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 CXCL9Q07325 125 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 HIC1Q14526 733 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 OTOP1Q7RTM1 612 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 NIM1KQ8IY84 436 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PRR14Q9BWN1 585 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 R3HDMLQ9H3Y0 253 aa10.75□□□□□ -0.69
CDK5RAP3-221ENST00000581662 SHTN1A0MZ66 631 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 CAMTA2O94983 1202 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 OATP04181 439 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 COPS2P61201 443 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 KRT26Q7Z3Y9 468 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ZNF516Q92618 1163 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ADM5C9JUS6 153 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 NPHP1O15259 732 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 TM4SF4P48230 202 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PLEKHO1Q53GL0 409 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 IRX2Q9BZI1 471 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 TRIM17Q9Y577 477 aa10.73□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ZNF333Q96JL9 665 aa10.72□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PTPN22Q9Y2R2 807 aa10.72□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ZNF609O15014 1411 aa10.72□□□□□ -0.69
CDK5RAP3-221ENST00000581662 SLC39A6Q13433 755 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 NEUROD1Q13562 356 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 EIF4A2Q14240 407 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 AMOTQ4VCS5 1084 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 NBPF5PQ86XG9 351 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 SLC52A2Q9HAB3 445 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 RAPGEFL1Q9UHV5 662 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 ZNRF3Q9ULT6 936 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
CDK5RAP3-221ENST00000581662 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
CDK5RAP3-221ENST00000581662 PPIP5K2O43314 1243 aa10.7□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
CDK5RAP3-221ENST00000581662 RIC1Q4ADV7 1423 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 PPM1GO15355 546 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 EGFRP00533 1210 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 AOC3Q16853 763 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 KMT5BQ4FZB7 885 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 DEFB123Q8N688 67 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 PXYLP1Q8TE99 480 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 VPS33BQ9H267 617 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CNOT7Q9UIV1 285 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
CDK5RAP3-221ENST00000581662 FECHP22830 423 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 FKBP1BP68106 108 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 C1orf141Q5JVX7 400 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 Q7L0L9 218 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 BCL2L13Q9BXK5 485 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 MTMR10Q9NXD2 777 aa10.68□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CACNA1AO00555 2505 aa10.67□□□□□ -0.7
CDK5RAP3-221ENST00000581662 STARD3NLO95772 234 aa10.67□□□□□ -0.7
CDK5RAP3-221ENST00000581662 PPP1R18Q6NYC8 613 aa10.67□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CDCA5Q96FF9 252 aa10.67□□□□□ -0.7
CDK5RAP3-221ENST00000581662 KIF7Q2M1P5 1343 aa10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 H7C1D1 291 aa10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CFHP08603 1231 aa10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 METTL3Q86U44 580 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 FAM122AQ96E09 287 aa10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 POLKQ9UBT6 870 aa10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 SIPA1L3O60292 1781 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-221ENST00000581662 ABCC12Q96J65 1359 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 RAD17O75943 681 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 HOXA10P31260 410 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 GGCXP38435 758 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CAP1Q01518 475 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 TNIP1Q15025 636 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 BLOC1S3Q6QNY0 202 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
CDK5RAP3-221ENST00000581662 UBE2Q1Q7Z7E8 422 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms