RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PODNQ7Z5L7 613 aa17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ZNF333Q96JL9 665 aa17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 ISCA1Q9BUE6 129 aa17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 CENPFP49454 3210 aa17.27■□□□□ 0.36
CDK5RAP3-213ENST00000579605 SLC9C1Q4G0N8 1177 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 NBPF11Q86T75 865 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 PLBD2Q8NHP8 589 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 WNK4Q96J92 1243 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 ZNF609O15014 1411 aa17.26■□□□□ 0.35
CDK5RAP3-213ENST00000579605 BRCA2P51587 3418 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 DPF3Q92784 378 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 PLEKHF1Q96S99 279 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 PTCH2Q9Y6C5 1203 aa17.25■□□□□ 0.35
CDK5RAP3-213ENST00000579605 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 ATP2B4P23634 1241 aa17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 DACT2Q5SW24 774 aa17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 APOBEC3FQ8IUX4 373 aaKnown RBP17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 JARID2Q92833 1246 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-213ENST00000579605 XDHP47989 1333 aa17.23■□□□□ 0.35
CDK5RAP3-213ENST00000579605 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
CDK5RAP3-213ENST00000579605 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-213ENST00000579605 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
CDK5RAP3-213ENST00000579605 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
CDK5RAP3-213ENST00000579605 PTPN18Q99952 460 aa17.22■□□□□ 0.35
CDK5RAP3-213ENST00000579605 DEFB129Q9H1M3 183 aa17.22■□□□□ 0.35
CDK5RAP3-213ENST00000579605 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
CDK5RAP3-213ENST00000579605 PPP1R12BO60237 982 aaPredicted RBP17.21■□□□□ 0.35
CDK5RAP3-213ENST00000579605 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
CDK5RAP3-213ENST00000579605 SH3TC2Q8TF17 1288 aa17.21■□□□□ 0.35
CDK5RAP3-213ENST00000579605 GJA5P36382 358 aa17.2■□□□□ 0.34
CDK5RAP3-213ENST00000579605 RIPK4P57078 832 aa17.2■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ZBTB38Q8NAP3 1195 aaPredicted RBP17.2■□□□□ 0.34
CDK5RAP3-213ENST00000579605 LAS1LQ9Y4W2 734 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ARHGEF6Q15052 776 aa17.19■□□□□ 0.34
CDK5RAP3-213ENST00000579605 HDGFL1Q5TGJ6 251 aa17.19■□□□□ 0.34
CDK5RAP3-213ENST00000579605 STRIP1Q5VSL9 837 aa17.19■□□□□ 0.34
CDK5RAP3-213ENST00000579605 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-213ENST00000579605 TRIM28Q13263 835 aaKnown RBP17.18■□□□□ 0.34
CDK5RAP3-213ENST00000579605 MAP3K11Q16584 847 aa17.18■□□□□ 0.34
CDK5RAP3-213ENST00000579605 TTLL5Q6EMB2 1281 aa17.18■□□□□ 0.34
CDK5RAP3-213ENST00000579605 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 DLG5Q8TDM6 1919 aa17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 PDE8AO60658 829 aa17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 HSP90B1P14625 803 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 RIC3Q7Z5B4 369 aa17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 BABAM1Q9NWV8 329 aa17.17■□□□□ 0.34
CDK5RAP3-213ENST00000579605 IREB2P48200 963 aaKnown RBP17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 GTF2IP78347 998 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 DLGAP5Q15398 846 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 NBPF12Q5TAG4 269 aaPredicted RBP17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 COA1Q9GZY4 146 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ELP3Q9H9T3 547 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
CDK5RAP3-213ENST00000579605 CLRN2A0PK11 232 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 USP2O75604 605 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 CCT4P50991 539 aaKnown RBP17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 TAF1CQ15572 869 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 MYD88Q99836 296 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 VEZTQ9HBM0 779 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 ZFYVE28Q9HCC9 887 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
CDK5RAP3-213ENST00000579605 TESPA1A2RU30 521 aaPredicted RBP17.14■□□□□ 0.33
CDK5RAP3-213ENST00000579605 OPTNQ96CV9 577 aa17.14■□□□□ 0.33
CDK5RAP3-213ENST00000579605 F8W031 263 aaPredicted RBP17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 MMP14P50281 582 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 MTFR1Q15390 333 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 ANKRD13AQ8IZ07 590 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 ARHGAP39Q9C0H5 1083 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CEP290O15078 2479 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 SOX1O00570 391 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 BRI3BPQ8WY22 251 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 A0A0C4DFX4 3053 aa17.12■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CCL15-CCL14A0A0B4J2E2 113 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 UNCXA6NJT0 531 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 KLRK1P26718 216 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 KIF22Q14807 665 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CCL15Q16663 113 aa17.11■□□□□ 0.33
CDK5RAP3-213ENST00000579605 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms