RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 ACPPP15309 386 aa8.13□□□□□ -1.11
PTPRM-207ENST00000578571 ZSCAN29Q8IWY8 852 aaPredicted RBP8.13□□□□□ -1.11
PTPRM-207ENST00000578571 AMOTL2Q9Y2J4 779 aa8.13□□□□□ -1.11
PTPRM-207ENST00000578571 GRIN2BQ13224 1484 aa8.13□□□□□ -1.11
PTPRM-207ENST00000578571 CNTNAP5Q8WYK1 1306 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 FAM181BA6NEQ2 426 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 GHRHP01286 108 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 POLR3DP05423 398 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 NEFLP07196 543 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 ATP11AP98196 1134 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 FMR1Q06787 632 aaKnown RBP eCLIP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 GRIK5Q16478 980 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 ELMSAN1Q6PJG2 1045 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 NCAPG2Q86XI2 1143 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 TTC9Q92623 222 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 PLD4Q96BZ4 506 aa8.12□□□□□ -1.11
PTPRM-207ENST00000578571 SMG9Q9H0W8 520 aaKnown RBP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 JPH1Q9HDC5 661 aaPredicted RBP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 EIF4G3O43432 1585 aaKnown RBP8.12□□□□□ -1.11
PTPRM-207ENST00000578571 TDRD9Q8NDG6 1382 aaKnown RBP8.11□□□□□ -1.11
PTPRM-207ENST00000578571 ABCA5Q8WWZ7 1642 aa8.11□□□□□ -1.11
PTPRM-207ENST00000578571 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
PTPRM-207ENST00000578571 RGS9O75916 674 aaPredicted RBP8.11□□□□□ -1.11
PTPRM-207ENST00000578571 AFF1P51825 1210 aaKnown RBP8.11□□□□□ -1.11
PTPRM-207ENST00000578571 CSRNP1Q96S65 589 aa8.11□□□□□ -1.11
PTPRM-207ENST00000578571 RASSF4Q9H2L5 321 aa8.11□□□□□ -1.11
PTPRM-207ENST00000578571 LATS2Q9NRM7 1088 aa8.11□□□□□ -1.11
PTPRM-207ENST00000578571 ERICH3Q5RHP9 1530 aa8.11□□□□□ -1.11
PTPRM-207ENST00000578571 LILRB5O75023 590 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 NID1P14543 1247 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 PLCB3Q01970 1234 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 PEAR1Q5VY43 1037 aaPredicted RBP8.1□□□□□ -1.11
PTPRM-207ENST00000578571 GALNT12Q8IXK2 581 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 SPACA7Q96KW9 195 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 DNAJC25Q9H1X3 360 aa8.1□□□□□ -1.11
PTPRM-207ENST00000578571 ZNF608Q9ULD9 1512 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-207ENST00000578571 CUL7Q14999 1698 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 PBRM1Q86U86 1689 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 MAGI1Q96QZ7 1491 aaPredicted RBP8.09□□□□□ -1.11
PTPRM-207ENST00000578571 ANKRD33BA6NCL7 494 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 NFKBIEO00221 500 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 EDN3P14138 238 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 ENOX2Q16206 610 aaKnown RBP8.09□□□□□ -1.11
PTPRM-207ENST00000578571 ADAMTSL4Q6UY14 1074 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 TRIM11Q96F44 468 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 PBX4Q9BYU1 374 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 RBSNQ9H1K0 784 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 DZANK1Q9NVP4 752 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
PTPRM-207ENST00000578571 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.12
PTPRM-207ENST00000578571 TRPA1O75762 1119 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 P4HBP07237 508 aaKnown RBP8.08□□□□□ -1.12
PTPRM-207ENST00000578571 TMCO4Q5TGY1 634 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 PODNQ7Z5L7 613 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 NPAS4Q8IUM7 802 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 BEND7Q8N7W2 519 aaPredicted RBP8.08□□□□□ -1.12
PTPRM-207ENST00000578571 CCDC74AQ96AQ1 378 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 HHIPQ96QV1 700 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 TRIM33Q9UPN9 1127 aa8.08□□□□□ -1.12
PTPRM-207ENST00000578571 PNMA6FA0A0J9YX94 578 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 GNB5O14775 395 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 CEP135Q66GS9 1140 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
PTPRM-207ENST00000578571 OSMRQ99650 979 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 NPHS2Q9NP85 383 aa8.07□□□□□ -1.12
PTPRM-207ENST00000578571 FHAD1B1AJZ9 1412 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 A0A1W2PP55 124 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 IRS1P35568 1242 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 MAPK8P45983 427 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 BAG6P46379 1132 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 SETDB2Q96T68 719 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 POP1Q99575 1024 aaKnown RBP8.06□□□□□ -1.12
PTPRM-207ENST00000578571 SNAPC4Q5SXM2 1469 aa8.06□□□□□ -1.12
PTPRM-207ENST00000578571 SMNDC1O75940 238 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTPRM-207ENST00000578571 GDF6Q6KF10 455 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-207ENST00000578571 TMEM102Q8N9M5 508 aaPredicted RBP8.05□□□□□ -1.12
PTPRM-207ENST00000578571 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
PTPRM-207ENST00000578571 WWC3Q9ULE0 1092 aa8.05□□□□□ -1.12
PTPRM-207ENST00000578571 PDE2AO00408 941 aaPredicted RBP8.04□□□□□ -1.12
PTPRM-207ENST00000578571 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 MSL1Q68DK7 614 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
PTPRM-207ENST00000578571 NXPE3Q969Y0 559 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 CARMIL1Q5VZK9 1371 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 SYNJ2O15056 1496 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 ADAMTS12P58397 1594 aa8.04□□□□□ -1.12
PTPRM-207ENST00000578571 RAPGEF2Q9Y4G8 1499 aa8.03□□□□□ -1.12
PTPRM-207ENST00000578571 COL8A1P27658 744 aa8.03□□□□□ -1.12
PTPRM-207ENST00000578571 GSK3AP49840 483 aa8.03□□□□□ -1.12
PTPRM-207ENST00000578571 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
PTPRM-207ENST00000578571 IL22RA1Q8N6P7 574 aa8.03□□□□□ -1.12
PTPRM-207ENST00000578571 TCF12Q99081 682 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms