RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SCRN1Q12765 414 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 METTL24Q5JXM2 366 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FERMT3Q86UX7 667 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 TTLL11Q8NHH1 800 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 APPBP2Q92624 585 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 OSBP2Q969R2 916 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZNF512BQ96KM6 892 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CCDC85AQ96PX6 553 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CDCA7Q9BWT1 371 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 SCAND2PQ9GZW5 306 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 RIPOR2Q9Y4F9 1068 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CICQ96RK0 1608 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NUP98P52948 1817 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NWD2Q9ULI1 1742 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 PDE8AO60658 829 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ITGA6P23229 1130 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZAP70P43403 619 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 WASHC4Q2M389 1173 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZSCAN25Q6NSZ9 544 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NSUN7Q8NE18 718 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FUCA2Q9BTY2 467 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 LRRC2Q9BYS8 371 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZSCAN16Q9H4T2 348 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 GREM2Q9H772 168 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 MYH7P12883 1935 aa11.03□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ATRNO75882 1429 aa11.02□□□□□ -0.64
CDK5RAP3-208ENST00000578525 H3BQV1 296 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MCM5P33992 734 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 APOBRQ0VD83 1088 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SCARF1Q14162 830 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 IMMTQ16891 758 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TPRNQ4KMQ1 711 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 IFFO2Q5TF58 517 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 LDHAL6AQ6ZMR3 332 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SYNE4Q8N205 404 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FBXL16Q8N461 479 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 LEO1Q8WVC0 666 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZNF274Q96GC6 653 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SPATA32Q96LK8 384 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 AK7Q96M32 723 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.02□□□□□ -0.659e-14■■□□□ 12.5
CDK5RAP3-208ENST00000578525 CNNM1Q9NRU3 951 aa11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NOL7Q9UMY1 257 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DDX60Q8IY21 1712 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 A0A0G2JLW4 131 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TTF1Q15361 905 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 GIMAP6Q6P9H5 292 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 VGLL2Q8N8G2 317 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SYTL4Q96C24 671 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DDX11Q96FC9 970 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NUP62CLQ9H1M0 184 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 DDX19AQ9NUU7 478 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 UBN2Q6ZU65 1347 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 WDR19Q8NEZ3 1342 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
CDK5RAP3-208ENST00000578525 LAMB2P55268 1798 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SLIT2O94813 1529 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 GOLGA6L4A6NEF3 574 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 FOXP2O15409 715 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CTDNEP1O95476 244 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 HCLS1P14317 486 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 LIG1P18858 919 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ARID4AP29374 1257 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PDIA3P30101 505 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ADD2P35612 726 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MCAMP43121 646 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 EVCP57679 992 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 NAP1L5Q96NT1 182 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CCDC87Q9NVE4 849 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZKSCAN5Q9Y2L8 839 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 THRAP3Q9Y2W1 955 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SPATA31A1Q5TZJ5 1347 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MROH5Q6ZUA9 1318 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 SALL1Q9NSC2 1324 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PHLPP1O60346 1717 aa11□□□□□ -0.65
CDK5RAP3-208ENST00000578525 AKAP11Q9UKA4 1901 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 GPAA1O43292 621 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PDE8BO95263 885 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CCDC192P0DO97 292 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 EIF5P55010 431 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ATL3Q6DD88 541 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZNF396Q96N95 335 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 CLSTN2Q9H4D0 955 aa10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
CDK5RAP3-208ENST00000578525 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms