RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 FKBP4Q02790 459 aaKnown RBP eCLIP22.44■■□□□ 1.18
PRKCA-203ENST00000578063 SCARF1Q14162 830 aa22.44■■□□□ 1.18
PRKCA-203ENST00000578063 LRRFIP1Q32MZ4 808 aaKnown RBP22.44■■□□□ 1.18
PRKCA-203ENST00000578063 NPR1P16066 1061 aa22.43■■□□□ 1.18
PRKCA-203ENST00000578063 UPF1Q92900 1129 aaKnown RBP eCLIP22.43■■□□□ 1.18
PRKCA-203ENST00000578063 ANO2Q9NQ90 1003 aa22.43■■□□□ 1.18
PRKCA-203ENST00000578063 SRGNP10124 158 aa22.43■■□□□ 1.18
PRKCA-203ENST00000578063 NMIQ13287 307 aaPredicted RBP22.43■■□□□ 1.18
PRKCA-203ENST00000578063 ZNF804BA4D1E1 1349 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 XDHP47989 1333 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 ZAP70P43403 619 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 TTF1Q15361 905 aaPredicted RBP22.42■■□□□ 1.18
PRKCA-203ENST00000578063 CAVIN4Q5BKX8 364 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 IL25Q9H293 177 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
PRKCA-203ENST00000578063 KIAA1211Q6ZU35 1233 aa22.41■■□□□ 1.18
PRKCA-203ENST00000578063 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
PRKCA-203ENST00000578063 LEMD3Q9Y2U8 911 aa22.41■■□□□ 1.18
PRKCA-203ENST00000578063 BCAMP50895 628 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 MASTLQ96GX5 879 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 FAM227BQ96M60 508 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 IPO9Q96P70 1041 aaKnown RBP22.4■■□□□ 1.18
PRKCA-203ENST00000578063 PDGFDQ9GZP0 370 aaPredicted RBP22.4■■□□□ 1.18
PRKCA-203ENST00000578063 ANKIB1Q9P2G1 1089 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 MCCP23508 829 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 SPATA5Q8NB90 893 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 ANTXR1Q9H6X2 564 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 HMG20BQ9P0W2 317 aa22.4■■□□□ 1.18
PRKCA-203ENST00000578063 MED23Q9ULK4 1368 aa22.39■■□□□ 1.18
PRKCA-203ENST00000578063 A0A0D9SFI3 127 aa22.39■■□□□ 1.17
PRKCA-203ENST00000578063 PPEF1O14829 653 aaPredicted RBP22.39■■□□□ 1.17
PRKCA-203ENST00000578063 ZFYP08048 801 aaPredicted RBP22.39■■□□□ 1.17
PRKCA-203ENST00000578063 RASGRF1Q13972 1273 aa22.39■■□□□ 1.17
PRKCA-203ENST00000578063 PI16Q6UXB8 463 aa22.39■■□□□ 1.17
PRKCA-203ENST00000578063 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
PRKCA-203ENST00000578063 AKAP11Q9UKA4 1901 aa22.39■■□□□ 1.17
PRKCA-203ENST00000578063 LRRC37AA6NMS7 1700 aa22.38■■□□□ 1.17
PRKCA-203ENST00000578063 VPS37DQ86XT2 251 aa22.38■■□□□ 1.17
PRKCA-203ENST00000578063 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.38■■□□□ 1.176e-7■■■■□ 21.6
PRKCA-203ENST00000578063 GYG1P46976 350 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 LSG1Q9H089 658 aaKnown RBP22.37■■□□□ 1.17
PRKCA-203ENST00000578063 SEMA3EO15041 775 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 ZBTB22O15209 634 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 RNF113AO15541 343 aaKnown RBP22.37■■□□□ 1.17
PRKCA-203ENST00000578063 CYP2E1P05181 493 aaPredicted RBP22.37■■□□□ 1.17
PRKCA-203ENST00000578063 ZSCAN25Q6NSZ9 544 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 FBXO33Q7Z6M2 555 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 C2CD5Q86YS7 1000 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 SP8Q8IXZ3 490 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 FAM84BQ96KN1 310 aaPredicted RBP22.37■■□□□ 1.17
PRKCA-203ENST00000578063 HELLSQ9NRZ9 838 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
PRKCA-203ENST00000578063 C10orf71Q711Q0 1435 aa22.36■■□□□ 1.17
PRKCA-203ENST00000578063 H0YIN7 160 aa22.36■■□□□ 1.17
PRKCA-203ENST00000578063 ATP2B4P23634 1241 aa22.36■■□□□ 1.17
PRKCA-203ENST00000578063 STYK1Q6J9G0 422 aa22.36■■□□□ 1.17
PRKCA-203ENST00000578063 ATP6V0A2Q9Y487 856 aa22.36■■□□□ 1.17
PRKCA-203ENST00000578063 IRS2Q9Y4H2 1338 aa22.35■■□□□ 1.17
PRKCA-203ENST00000578063 WTIPA6NIX2 430 aaPredicted RBP22.35■■□□□ 1.17
PRKCA-203ENST00000578063 GPSM2P81274 684 aa22.35■■□□□ 1.17
PRKCA-203ENST00000578063 MCMDC2Q4G0Z9 681 aa22.35■■□□□ 1.17
PRKCA-203ENST00000578063 ZMYM1Q5SVZ6 1142 aa22.35■■□□□ 1.17
PRKCA-203ENST00000578063 C15orf52Q6ZUT6 534 aaKnown RBP22.35■■□□□ 1.17
PRKCA-203ENST00000578063 CCDC171Q6TFL3 1326 aa22.35■■□□□ 1.17
PRKCA-203ENST00000578063 HIBADHP31937 336 aaKnown RBP22.34■■□□□ 1.17
PRKCA-203ENST00000578063 KIF2CQ99661 725 aa22.34■■□□□ 1.17
PRKCA-203ENST00000578063 GGA1Q9UJY5 639 aa22.34■■□□□ 1.17
PRKCA-203ENST00000578063 DENND2AQ9ULE3 1009 aa22.34■■□□□ 1.17
PRKCA-203ENST00000578063 NSFL1CQ9UNZ2 370 aaKnown RBP22.34■■□□□ 1.17
PRKCA-203ENST00000578063 PDS5AQ29RF7 1337 aaKnown RBP22.34■■□□□ 1.17
PRKCA-203ENST00000578063 KLRK1P26718 216 aa22.34■■□□□ 1.17
PRKCA-203ENST00000578063 PIH1D3Q9NQM4 214 aaKnown RBP22.34■■□□□ 1.17
PRKCA-203ENST00000578063 ANAPC15P60006 121 aa22.33■■□□□ 1.17
PRKCA-203ENST00000578063 UFL1O94874 794 aa22.32■■□□□ 1.16
PRKCA-203ENST00000578063 HSPA4P34932 840 aa22.32■■□□□ 1.16
PRKCA-203ENST00000578063 ZNF589Q86UQ0 364 aaPredicted RBP22.32■■□□□ 1.16
PRKCA-203ENST00000578063 ZNF622Q969S3 477 aaKnown RBP eCLIP22.32■■□□□ 1.164e-7■■□□□ 13.3
PRKCA-203ENST00000578063 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
PRKCA-203ENST00000578063 BECN1Q14457 450 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 R3HDM1Q15032 1099 aaKnown RBP22.31■■□□□ 1.16
PRKCA-203ENST00000578063 SLC51AQ86UW1 340 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 APPBP2Q92624 585 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 LTBP1Q14766 1721 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 IDH1O75874 414 aaKnown RBP22.31■■□□□ 1.16
PRKCA-203ENST00000578063 CHGBP05060 677 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 ADD2P35612 726 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 MAP3K12Q12852 859 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 RABEP1Q15276 862 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 UBE3CQ15386 1083 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 ZNF804AQ7Z570 1209 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 CNKSR1Q969H4 720 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 MTFR1LQ9H019 292 aa22.31■■□□□ 1.16
PRKCA-203ENST00000578063 COL1A1P02452 1464 aaPredicted RBP22.3■■□□□ 1.16
PRKCA-203ENST00000578063 ZBTB7AO95365 584 aa22.3■■□□□ 1.16
PRKCA-203ENST00000578063 PTH1RQ03431 593 aa22.3■■□□□ 1.16
PRKCA-203ENST00000578063 WASHC4Q2M389 1173 aa22.3■■□□□ 1.16
PRKCA-203ENST00000578063 IL17RAQ96F46 866 aa22.3■■□□□ 1.16
PRKCA-203ENST00000578063 SEC62Q99442 399 aaKnown RBP22.3■■□□□ 1.16
PRKCA-203ENST00000578063 MAST3O60307 1309 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms