RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 KIF3CO14782 793 aa17.25■□□□□ 0.35
SNORD3B-1-201ENST00000577988 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
SNORD3B-1-201ENST00000577988 IRS2Q9Y4H2 1338 aa17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 WTIPA6NIX2 430 aaPredicted RBP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 VIL1P09327 827 aaKnown RBP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 G3BP1Q13283 466 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 ZNF804AQ7Z570 1209 aa17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 TXNRD3Q86VQ6 643 aa17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 PA2G4Q9UQ80 394 aaKnown RBP17.24■□□□□ 0.35
SNORD3B-1-201ENST00000577988 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 POTECB2RU33 542 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 RAD17O75943 681 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 FGFR2P21802 821 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 LMOD1P29536 600 aaPredicted RBP17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 LPIN2Q92539 896 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 DPF2Q92785 391 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 SIL1Q9H173 461 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 C1orf115Q9H7X2 142 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 CD209Q9NNX6 404 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 PSME4Q14997 1843 aa17.23■□□□□ 0.35
SNORD3B-1-201ENST00000577988 SNAP23O00161 211 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 HMMRO75330 724 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 TOMM70O94826 608 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 IL1R1P14778 569 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 MMP14P50281 582 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 CAVIN4Q5BKX8 364 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 STRIP1Q5VSL9 837 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 AKAP2Q9Y2D5 859 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 SCN9AQ15858 1988 aa17.22■□□□□ 0.35
SNORD3B-1-201ENST00000577988 PSMD14O00487 310 aa17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 SLC5A1P13866 664 aa17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 AAMPQ13685 434 aa17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 PNMA8AQ86V59 439 aaPredicted RBP17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 AGBL3Q8NEM8 1001 aa17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 FAM84BQ96KN1 310 aaPredicted RBP17.21■□□□□ 0.35
SNORD3B-1-201ENST00000577988 ZNF609O15014 1411 aa17.21■□□□□ 0.34
SNORD3B-1-201ENST00000577988 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 KLRK1P26718 216 aa17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 SCNN1DP51172 638 aa17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 TAF1DQ9H5J8 278 aaPredicted RBP17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 MYO3BQ8WXR4 1341 aa17.2■□□□□ 0.34
SNORD3B-1-201ENST00000577988 H7C1D1 291 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 ZBTB22O15209 634 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 SASH1O94885 1247 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 EPHX2P34913 555 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 ATP2B3Q16720 1220 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 VPS37DQ86XT2 251 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 RBM46Q8TBY0 533 aaKnown RBP17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 KCNQ5Q9NR82 932 aa17.19■□□□□ 0.34
SNORD3B-1-201ENST00000577988 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
SNORD3B-1-201ENST00000577988 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
SNORD3B-1-201ENST00000577988 ADARB2Q9NS39 739 aaKnown RBP17.18■□□□□ 0.34
SNORD3B-1-201ENST00000577988 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GYG1P46976 350 aa17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 DACT2Q5SW24 774 aa17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GMLQ99445 158 aa17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 FAM205AQ6ZU69 1335 aa17.17■□□□□ 0.34
SNORD3B-1-201ENST00000577988 EPS15P42566 896 aa17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GTF2IP78347 998 aa17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 TFCP2Q12800 502 aa17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 FSTL1Q12841 308 aa17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 LDHDQ86WU2 507 aa17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
SNORD3B-1-201ENST00000577988 SMC1BQ8NDV3 1235 aa17.15■□□□□ 0.34
SNORD3B-1-201ENST00000577988 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
SNORD3B-1-201ENST00000577988 SUPT16HQ9Y5B9 1047 aaKnown RBP17.15■□□□□ 0.34
SNORD3B-1-201ENST00000577988 A0A1B0GUL7 405 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 SEMA3EO15041 775 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 USP17L8P0C7I0 530 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 BCAMP50895 628 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 SIRT2Q8IXJ6 389 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 MICALL2Q8IY33 904 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 TBC1D22AQ8WUA7 517 aa17.14■□□□□ 0.33
SNORD3B-1-201ENST00000577988 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
SNORD3B-1-201ENST00000577988 ZNF280AP59817 542 aaPredicted RBP17.13■□□□□ 0.33
SNORD3B-1-201ENST00000577988 C1QTNF8P60827 252 aa17.13■□□□□ 0.33
SNORD3B-1-201ENST00000577988 TIMM10P62072 90 aa17.13■□□□□ 0.33
SNORD3B-1-201ENST00000577988 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms