RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 RBM26Q5T8P6 1007 aaKnown RBP19.06■□□□□ 0.64
SMG6-220ENST00000576218 RSBN1LQ6PCB5 846 aaPredicted RBP19.06■□□□□ 0.64
SMG6-220ENST00000576218 CNTROBQ8N137 903 aa19.06■□□□□ 0.64
SMG6-220ENST00000576218 MEIS3Q99687 375 aa19.06■□□□□ 0.64
SMG6-220ENST00000576218 PUS3Q9BZE2 481 aaKnown RBP19.06■□□□□ 0.64
SMG6-220ENST00000576218 SNAP23O00161 211 aa19.05■□□□□ 0.64
SMG6-220ENST00000576218 VIL1P09327 827 aaKnown RBP19.05■□□□□ 0.64
SMG6-220ENST00000576218 HTRA3P83110 453 aa19.05■□□□□ 0.64
SMG6-220ENST00000576218 TXNRD3Q86VQ6 643 aa19.05■□□□□ 0.64
SMG6-220ENST00000576218 SHTN1A0MZ66 631 aa19.04■□□□□ 0.64
SMG6-220ENST00000576218 TBC1D10BQ4KMP7 808 aaPredicted RBP19.04■□□□□ 0.64
SMG6-220ENST00000576218 VPS37DQ86XT2 251 aa19.04■□□□□ 0.64
SMG6-220ENST00000576218 AGBL3Q8NEM8 1001 aa19.04■□□□□ 0.64
SMG6-220ENST00000576218 KLHDC4Q8TBB5 520 aa19.04■□□□□ 0.64
SMG6-220ENST00000576218 TNNQ9UQP3 1299 aa19.04■□□□□ 0.64
SMG6-220ENST00000576218 LRRC24Q50LG9 513 aa19.03■□□□□ 0.64
SMG6-220ENST00000576218 SAMD7Q7Z3H4 446 aa19.03■□□□□ 0.64
SMG6-220ENST00000576218 ITPRIPQ8IWB1 547 aa19.03■□□□□ 0.64
SMG6-220ENST00000576218 TRPM4Q8TD43 1214 aa19.03■□□□□ 0.64
SMG6-220ENST00000576218 SIL1Q9H173 461 aa19.03■□□□□ 0.64
SMG6-220ENST00000576218 MYO3BQ8WXR4 1341 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 GTF2IP78347 998 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 UBE4AQ14139 1066 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 KIF4BQ2VIQ3 1234 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 STRIP1Q5VSL9 837 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 DZIP1LQ8IYY4 767 aaKnown RBP19.02■□□□□ 0.64
SMG6-220ENST00000576218 OGFOD1Q8N543 542 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 TMEM57Q8N5G2 664 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 CD209Q9NNX6 404 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 SCN9AQ15858 1988 aa19.02■□□□□ 0.64
SMG6-220ENST00000576218 ADAMTSL1Q8N6G6 1762 aa19.01■□□□□ 0.63
SMG6-220ENST00000576218 GNAI2P04899 355 aa19.01■□□□□ 0.63
SMG6-220ENST00000576218 USP17L8P0C7I0 530 aa19.01■□□□□ 0.63
SMG6-220ENST00000576218 RIPOR2Q9Y4F9 1068 aa19.01■□□□□ 0.63
SMG6-220ENST00000576218 A0A1B0GUL6 1792 aa19.01■□□□□ 0.63
SMG6-220ENST00000576218 EYA2O00167 538 aa19■□□□□ 0.63
SMG6-220ENST00000576218 FRAT2O75474 233 aaPredicted RBP19■□□□□ 0.63
SMG6-220ENST00000576218 CAVIN4Q5BKX8 364 aa19■□□□□ 0.63
SMG6-220ENST00000576218 C15orf52Q6ZUT6 534 aaKnown RBP19■□□□□ 0.63
SMG6-220ENST00000576218 ZC3H15Q8WU90 426 aaKnown RBP19■□□□□ 0.63
SMG6-220ENST00000576218 CREBZFQ9NS37 354 aa19■□□□□ 0.63
SMG6-220ENST00000576218 PASKQ96RG2 1323 aa19■□□□□ 0.63
SMG6-220ENST00000576218 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
SMG6-220ENST00000576218 SRGAP3O43295 1099 aa18.99■□□□□ 0.63
SMG6-220ENST00000576218 ITGBL1O95965 494 aaPredicted RBP18.99■□□□□ 0.63
SMG6-220ENST00000576218 IFIT1P09914 478 aaKnown RBP18.99■□□□□ 0.63
SMG6-220ENST00000576218 DACT2Q5SW24 774 aa18.99■□□□□ 0.63
SMG6-220ENST00000576218 DCPSQ96C86 337 aaKnown RBP18.99■□□□□ 0.63
SMG6-220ENST00000576218 MXD3Q9BW11 206 aa18.99■□□□□ 0.63
SMG6-220ENST00000576218 HDAC9Q9UKV0 1011 aa18.99■□□□□ 0.63
SMG6-220ENST00000576218 PDE8BO95263 885 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 MS4A1P11836 297 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 HIBADHP31937 336 aaKnown RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 GYG1P46976 350 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 HIRAP54198 1017 aaPredicted RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 PTPN12Q05209 780 aaKnown RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 PUM3Q15397 648 aaKnown RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 ZNF408Q9H9D4 720 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 MYOZ2Q9NPC6 264 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 ABT1Q9ULW3 272 aaKnown RBP18.98■□□□□ 0.63
SMG6-220ENST00000576218 JAG2Q9Y219 1238 aa18.98■□□□□ 0.63
SMG6-220ENST00000576218 PSME4Q14997 1843 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 SLC5A1P13866 664 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 RFX5P48382 616 aaPredicted RBP18.97■□□□□ 0.63
SMG6-220ENST00000576218 CDC37L1Q7L3B6 337 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 KIAA0825Q8IV33 1275 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 GLIS2Q9BZE0 524 aaPredicted RBP18.97■□□□□ 0.63
SMG6-220ENST00000576218 CEP126Q9P2H0 1117 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 ZNF609O15014 1411 aa18.97■□□□□ 0.63
SMG6-220ENST00000576218 TRAF5O00463 557 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 EGFRP00533 1210 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 IL1R1P14778 569 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 PAXIP1Q6ZW49 1069 aaPredicted RBP18.96■□□□□ 0.63
SMG6-220ENST00000576218 KLRG1Q96E93 195 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 GGA3Q9NZ52 723 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 FBXO3Q9UK99 471 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 PA2G4Q9UQ80 394 aaKnown RBP18.96■□□□□ 0.63
SMG6-220ENST00000576218 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
SMG6-220ENST00000576218 CIAO1O76071 339 aa18.95■□□□□ 0.62
SMG6-220ENST00000576218 IL15P40933 162 aaPredicted RBP18.95■□□□□ 0.62
SMG6-220ENST00000576218 ZNF280AP59817 542 aaPredicted RBP18.95■□□□□ 0.62
SMG6-220ENST00000576218 KRT26Q7Z3Y9 468 aa18.95■□□□□ 0.62
SMG6-220ENST00000576218 SULF1Q8IWU6 871 aa18.95■□□□□ 0.62
SMG6-220ENST00000576218 MKRN1Q9UHC7 482 aaKnown RBP18.95■□□□□ 0.62
SMG6-220ENST00000576218 IRS2Q9Y4H2 1338 aa18.95■□□□□ 0.62
SMG6-220ENST00000576218 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
SMG6-220ENST00000576218 CELF2O95319 508 aaKnown RBP18.94■□□□□ 0.62
SMG6-220ENST00000576218 CHAF1AQ13111 956 aaPredicted RBP18.94■□□□□ 0.62
SMG6-220ENST00000576218 SCARF1Q14162 830 aa18.94■□□□□ 0.62
SMG6-220ENST00000576218 ATP2B3Q16720 1220 aa18.94■□□□□ 0.62
SMG6-220ENST00000576218 USP48Q86UV5 1035 aa18.94■□□□□ 0.62
SMG6-220ENST00000576218 GMLQ99445 158 aa18.94■□□□□ 0.62
SMG6-220ENST00000576218 IQSEC3Q9UPP2 1182 aaPredicted RBP18.94■□□□□ 0.62
SMG6-220ENST00000576218 SASH1O94885 1247 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 MMP14P50281 582 aa18.93■□□□□ 0.62
SMG6-220ENST00000576218 ANGEL2Q5VTE6 544 aaKnown RBP18.93■□□□□ 0.62
SMG6-220ENST00000576218 VGLL2Q8N8G2 317 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms