RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CRHR2Q13324 411 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 LDLRAD1Q5T700 205 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 FBXW7Q969H0 707 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 WNK4Q96J92 1243 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.71□□□□□ -1.18
SMG6-219ENST00000575663 RBM27Q9P2N5 1060 aaKnown RBP7.71□□□□□ -1.18
SMG6-219ENST00000575663 PPP2R3BQ9Y5P8 575 aa7.71□□□□□ -1.18
SMG6-219ENST00000575663 SASH1O94885 1247 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 ATP2B4P23634 1241 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 MAP3K11Q16584 847 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 CCDC152Q4G0S7 254 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 RTL5Q5HYW3 569 aaPredicted RBP7.7□□□□□ -1.18
SMG6-219ENST00000575663 PLBD2Q8NHP8 589 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 DPF3Q92784 378 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 ZNF428Q96B54 188 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 HTATIP2Q9BUP3 242 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
SMG6-219ENST00000575663 PTCH2Q9Y6C5 1203 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 MED23Q9ULK4 1368 aa7.7□□□□□ -1.18
SMG6-219ENST00000575663 A0A1W2PPC1 479 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 WDHD1O75717 1129 aaPredicted RBP7.69□□□□□ -1.18
SMG6-219ENST00000575663 DACT2Q5SW24 774 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 STRIP1Q5VSL9 837 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 ANKRD18AQ8IVF6 992 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 NKX2-3Q8TAU0 364 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 NR2E3Q9Y5X4 410 aa7.69□□□□□ -1.18
SMG6-219ENST00000575663 SCN9AQ15858 1988 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 ATP5J2-PTCD1G3V325 749 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 MYO1BO43795 1136 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
SMG6-219ENST00000575663 PPP2R1AP30153 589 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 IREB2P48200 963 aaKnown RBP7.68□□□□□ -1.18
SMG6-219ENST00000575663 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 KIF22Q14807 665 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 SUPT20HL1Q3ZLR7 823 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 ISCA1Q9BUE6 129 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 COA1Q9GZY4 146 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 DEFB129Q9H1M3 183 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 SEC31BQ9NQW1 1179 aa7.68□□□□□ -1.18
SMG6-219ENST00000575663 COL4A1P02462 1669 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
SMG6-219ENST00000575663 PDE8AO60658 829 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 PRMT2P55345 433 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 TAF1CQ15572 869 aaPredicted RBP7.67□□□□□ -1.18
SMG6-219ENST00000575663 HDGFL1Q5TGJ6 251 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 KIAA0825Q8IV33 1275 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 ANKRD13AQ8IZ07 590 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 ZBTB38Q8NAP3 1195 aaPredicted RBP7.67□□□□□ -1.18
SMG6-219ENST00000575663 CLMNQ96JQ2 1002 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 CDC5LQ99459 802 aaKnown RBP7.67□□□□□ -1.18
SMG6-219ENST00000575663 CHPF2Q9P2E5 772 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 FZD1Q9UP38 647 aa7.67□□□□□ -1.18
SMG6-219ENST00000575663 POLR2AP24928 1970 aaKnown RBP7.67□□□□□ -1.18
SMG6-219ENST00000575663 GNRH1P01148 92 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 GOLGA2Q08379 1002 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 TRIM28Q13263 835 aaKnown RBP7.66□□□□□ -1.18
SMG6-219ENST00000575663 DLGAP5Q15398 846 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 SH3TC2Q8TF17 1288 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 PLEKHF1Q96S99 279 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 MXD3Q9BW11 206 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 DBF4Q9UBU7 674 aaPredicted RBP7.66□□□□□ -1.18
SMG6-219ENST00000575663 ZNF804BA4D1E1 1349 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 SSC5DA1L4H1 1573 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 PSME4Q14997 1843 aa7.66□□□□□ -1.18
SMG6-219ENST00000575663 HOXB7P09629 217 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 TAF1P21675 1872 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 GJA5P36382 358 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 TTLL5Q6EMB2 1281 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 OPTNQ96CV9 577 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 SHISA4Q96DD7 197 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 CCDC85AQ96PX6 553 aaPredicted RBP7.65□□□□□ -1.18
SMG6-219ENST00000575663 PTPN18Q99952 460 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 PRO3102Q9H379 93 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 VEZTQ9HBM0 779 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 HYPKQ9NX55 129 aa7.65□□□□□ -1.18
SMG6-219ENST00000575663 CCL15-CCL14A0A0B4J2E2 113 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 PCCAP05165 728 aaPredicted RBP7.64□□□□□ -1.19
SMG6-219ENST00000575663 CCT4P50991 539 aaKnown RBP7.64□□□□□ -1.19
SMG6-219ENST00000575663 GTF2A2P52657 109 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 CAP1Q01518 475 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 TNFAIP1Q13829 316 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 CCL15Q16663 113 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 GPR153Q6NV75 609 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 RIC3Q7Z5B4 369 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 CCDC191Q8NCU4 936 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 ZBED3Q96IU2 234 aaPredicted RBP7.64□□□□□ -1.19
SMG6-219ENST00000575663 PCGF6Q9BYE7 350 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 ELP3Q9H9T3 547 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 BSDC1Q9NW68 430 aaPredicted RBP7.64□□□□□ -1.19
SMG6-219ENST00000575663 LEMD3Q9Y2U8 911 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 RANBP2P49792 3224 aaKnown RBP7.64□□□□□ -1.19
SMG6-219ENST00000575663 LAMB1P07942 1786 aa7.64□□□□□ -1.19
SMG6-219ENST00000575663 CLRN2A0PK11 232 aa7.63□□□□□ -1.19
SMG6-219ENST00000575663 WTIPA6NIX2 430 aaPredicted RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 ZBTB7BO15156 539 aaPredicted RBP7.63□□□□□ -1.19
SMG6-219ENST00000575663 EVI5O60447 810 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms