RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 TMC1Q8TDI8 760 aa7.08□□□□□ -1.28
TSR1-203ENST00000575049 PIK3R2O00459 728 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 IGHA2P01877 340 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 MAPK1P28482 360 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 ERCC5P28715 1186 aaPredicted RBP7.07□□□□□ -1.28
TSR1-203ENST00000575049 COL9A3Q14050 684 aaPredicted RBP7.07□□□□□ -1.28
TSR1-203ENST00000575049 NCAPG2Q86XI2 1143 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 PLD4Q96BZ4 506 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 SMG9Q9H0W8 520 aaKnown RBP7.07□□□□□ -1.28
TSR1-203ENST00000575049 RBSNQ9H1K0 784 aa7.07□□□□□ -1.28
TSR1-203ENST00000575049 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
TSR1-203ENST00000575049 EREGO14944 169 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 GPR182O15218 404 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 NID1P14543 1247 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 IRS1P35568 1242 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 AFF1P51825 1210 aaKnown RBP7.06□□□□□ -1.28
TSR1-203ENST00000575049 TSNAXIP1Q2TAA8 658 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 TMC7Q7Z402 723 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 TTC9Q92623 222 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 TRIM11Q96F44 468 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 SPACA7Q96KW9 195 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
TSR1-203ENST00000575049 GRIK5Q16478 980 aa7.05□□□□□ -1.28
TSR1-203ENST00000575049 SUV39H2Q9H5I1 410 aa7.05□□□□□ -1.28
TSR1-203ENST00000575049 ZFYVE28Q9HCC9 887 aa7.05□□□□□ -1.28
TSR1-203ENST00000575049 NEFLP07196 543 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 ATP11AP98196 1134 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 KCNMA1Q12791 1236 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 ORC1Q13415 861 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 NOP9Q86U38 636 aaKnown RBP7.04□□□□□ -1.28
TSR1-203ENST00000575049 FAM9AQ8IZU1 332 aaPredicted RBP7.04□□□□□ -1.28
TSR1-203ENST00000575049 CEP120Q8N960 986 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 ALKBH8Q96BT7 664 aaKnown RBP7.04□□□□□ -1.28
TSR1-203ENST00000575049 PLVAPQ9BX97 442 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 BACH2Q9BYV9 841 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 NIF3L1Q9GZT8 377 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 RASSF4Q9H2L5 321 aa7.04□□□□□ -1.28
TSR1-203ENST00000575049 NOP53Q9NZM5 478 aaKnown RBP7.04□□□□□ -1.28
TSR1-203ENST00000575049 ACPPP15309 386 aa7.03□□□□□ -1.28
TSR1-203ENST00000575049 GSK3AP49840 483 aa7.03□□□□□ -1.28
TSR1-203ENST00000575049 HDLBPQ00341 1268 aaKnown RBP7.03□□□□□ -1.28
TSR1-203ENST00000575049 MARCH6O60337 910 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 SMNDC1O75940 238 aaKnown RBP eCLIP7.02□□□□□ -1.298e-26■■■■■ 33.2
TSR1-203ENST00000575049 POLR3DP05423 398 aaPredicted RBP7.02□□□□□ -1.29
TSR1-203ENST00000575049 EDN3P14138 238 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 COL8A1P27658 744 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 RASSF7Q02833 373 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 C9orf131Q5VYM1 1079 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 GDF6Q6KF10 455 aaPredicted RBP7.02□□□□□ -1.29
TSR1-203ENST00000575049 NOL8Q76FK4 1167 aaKnown RBP7.02□□□□□ -1.29
TSR1-203ENST00000575049 ZSCAN29Q8IWY8 852 aaPredicted RBP7.02□□□□□ -1.29
TSR1-203ENST00000575049 ASB16Q96NS5 453 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 TRIM33Q9UPN9 1127 aa7.02□□□□□ -1.29
TSR1-203ENST00000575049 SPDYE3A6NKU9 549 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 TREHO43280 583 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 CPNE3O75131 537 aaKnown RBP7.01□□□□□ -1.29
TSR1-203ENST00000575049 DSC3Q14574 896 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 USPL1Q5W0Q7 1092 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 MSL1Q68DK7 614 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 LNPKQ9C0E8 428 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 DNAJC25Q9H1X3 360 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 DZANK1Q9NVP4 752 aa7.01□□□□□ -1.29
TSR1-203ENST00000575049 NFKBIEO00221 500 aa7□□□□□ -1.29
TSR1-203ENST00000575049 EIF1AYO14602 144 aaKnown RBP7□□□□□ -1.29
TSR1-203ENST00000575049 SCAMP3O14828 347 aaKnown RBP7□□□□□ -1.29
TSR1-203ENST00000575049 BAG6P46379 1132 aa7□□□□□ -1.29
TSR1-203ENST00000575049 RAD51AP2Q09MP3 1159 aa7□□□□□ -1.29
TSR1-203ENST00000575049 COL19A1Q14993 1142 aa7□□□□□ -1.29
TSR1-203ENST00000575049 TRAPPC3LQ5T215 181 aa7□□□□□ -1.29
TSR1-203ENST00000575049 ILDR2Q71H61 639 aa7□□□□□ -1.29
TSR1-203ENST00000575049 WFDC8Q8IUA0 241 aa7□□□□□ -1.29
TSR1-203ENST00000575049 GALNT12Q8IXK2 581 aa7□□□□□ -1.29
TSR1-203ENST00000575049 DMRTC2Q8IXT2 367 aaPredicted RBP7□□□□□ -1.29
TSR1-203ENST00000575049 CSRNP1Q96S65 589 aa7□□□□□ -1.29
TSR1-203ENST00000575049 DNAJC2Q99543 621 aaKnown RBP7□□□□□ -1.29
TSR1-203ENST00000575049 OSMRQ99650 979 aa7□□□□□ -1.29
TSR1-203ENST00000575049 ZKSCAN3Q9BRR0 538 aa7□□□□□ -1.29
TSR1-203ENST00000575049 TANGO6Q9C0B7 1094 aa7□□□□□ -1.29
TSR1-203ENST00000575049 LATS2Q9NRM7 1088 aa7□□□□□ -1.29
TSR1-203ENST00000575049 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 TRPA1O75762 1119 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 PLCB3Q01970 1234 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
TSR1-203ENST00000575049 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
TSR1-203ENST00000575049 ALYREFQ86V81 257 aaKnown RBP6.99□□□□□ -1.29
TSR1-203ENST00000575049 CACTIN-AS1Q8N1I8 211 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 DCAF5Q96JK2 942 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 HHIPQ96QV1 700 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
TSR1-203ENST00000575049 LACRTQ9GZZ8 138 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 BCL11AQ9H165 835 aa6.99□□□□□ -1.29
TSR1-203ENST00000575049 SBNO2Q9Y2G9 1366 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 TLDC2A0PJX2 215 aa6.98□□□□□ -1.29
TSR1-203ENST00000575049 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
TSR1-203ENST00000575049 GDF11O95390 407 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms