RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 FAM89AQ96GI7 184 aa10.6□□□□□ -0.71
NPLOC4-211ENST00000573212 PODXL2Q9NZ53 605 aa10.6□□□□□ -0.71
NPLOC4-211ENST00000573212 RTL9Q8NET4 1388 aa10.6□□□□□ -0.71
NPLOC4-211ENST00000573212 C19orf67A6NJJ6 358 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 ECE2O60344 883 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 TRPA1O75762 1119 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 SLC10A3P09131 477 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 ZNF157P51786 506 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 RPS8P62241 208 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 GPIHBP1Q8IV16 184 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
NPLOC4-211ENST00000573212 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 ZNF280AP59817 542 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 EYA3Q99504 573 aa10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 ZC3H12CQ9C0D7 883 aaKnown RBP10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 TRIM35Q9UPQ4 493 aa10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 DLG5Q8TDM6 1919 aa10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 ASTN2O75129 1339 aaPredicted RBP10.58□□□□□ -0.72
NPLOC4-211ENST00000573212 IRS4O14654 1257 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 HOXB7P09629 217 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 KIF4BQ2VIQ3 1234 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 GMLQ99445 158 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 TRPC6Q9Y210 931 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 CASP8AP2Q9UKL3 1982 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 ANKRD36CQ5JPF3 1778 aa10.57□□□□□ -0.72
NPLOC4-211ENST00000573212 SCARF1Q14162 830 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 RASAL3Q86YV0 1011 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 SULF1Q8IWU6 871 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 AGBL3Q8NEM8 1001 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 CDCA5Q96FF9 252 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 SEC31BQ9NQW1 1179 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 GGA3Q9NZ52 723 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 COL4A1P02462 1669 aa10.56□□□□□ -0.72
NPLOC4-211ENST00000573212 FKBP1BP68106 108 aa10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 CTU1Q7Z7A3 348 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 ZBTB38Q8NAP3 1195 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 ZNF609O15014 1411 aa10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 LRRC37AA6NMS7 1700 aa10.55□□□□□ -0.72
NPLOC4-211ENST00000573212 LAMB2P55268 1798 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 TM4SF4P48230 202 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 SOX10P56693 466 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 GOLGA2Q08379 1002 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 RALBP1Q15311 655 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 PPP1R15BQ5SWA1 713 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 ANGEL2Q5VTE6 544 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 MS4A3Q96HJ5 214 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 GGA1Q9UJY5 639 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 PITPNM2Q9BZ72 1349 aa10.54□□□□□ -0.72
NPLOC4-211ENST00000573212 ZNF853P0CG23 659 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 PKN2Q16513 984 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 NOM1Q5C9Z4 860 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 PODNQ7Z5L7 613 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 TMEM106CQ9BVX2 250 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 GPHNQ9NQX3 736 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 HPS5Q9UPZ3 1129 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 TAF1P21675 1872 aa10.53□□□□□ -0.72
NPLOC4-211ENST00000573212 WTIPA6NIX2 430 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 TRIM66O15016 1216 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 PDE8AO60658 829 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 UFL1O94874 794 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 PCCAP05165 728 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 MOB2Q70IA6 237 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 CCDC191Q8NCU4 936 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 ZNF296Q8WUU4 475 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 RUNDC1Q96C34 613 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 ANKIB1Q9P2G1 1089 aa10.52□□□□□ -0.73
NPLOC4-211ENST00000573212 DDX60Q8IY21 1712 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 G3V3G9 751 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 TBC1D8O95759 1140 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 CCDC152Q4G0S7 254 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 PRPF38BQ5VTL8 546 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 RIC3Q7Z5B4 369 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 CFHR5Q9BXR6 569 aa10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 TNRC18O15417 2968 aaPredicted RBP10.51□□□□□ -0.73
NPLOC4-211ENST00000573212 GPR25O00155 361 aa10.5□□□□□ -0.73
NPLOC4-211ENST00000573212 PDE4DQ08499 809 aa10.5□□□□□ -0.73
NPLOC4-211ENST00000573212 NBPF9Q3BBW0 867 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms