RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
SF3B3-214ENST00000572365 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 PIK3R5Q8WYR1 880 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 RUBCNLQ9H714 662 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 GPAMQ9HCL2 828 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 CCNB3Q8WWL7 1395 aa8.35□□□□□ -1.07
SF3B3-214ENST00000572365 MAP3K1Q13233 1512 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 KDM5DQ9BY66 1539 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 SPATA31A6Q5VVP1 1343 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 RBM6P78332 1123 aaKnown RBP8.34□□□□□ -1.07
SF3B3-214ENST00000572365 PLCB3Q01970 1234 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 TYRO3Q06418 890 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 SAMD5Q5TGI4 173 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 PGBD3Q8N328 593 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 GGNBP2Q9H3C7 697 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 MSH6P52701 1360 aa8.34□□□□□ -1.07
SF3B3-214ENST00000572365 CEP152O94986 1710 aa8.33□□□□□ -1.08
SF3B3-214ENST00000572365 TAGLNQ01995 201 aaKnown RBP8.33□□□□□ -1.08
SF3B3-214ENST00000572365 LBRQ14739 615 aaKnown RBP8.33□□□□□ -1.08
SF3B3-214ENST00000572365 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
SF3B3-214ENST00000572365 GAS2L1Q99501 681 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-214ENST00000572365 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
SF3B3-214ENST00000572365 GJA3Q9Y6H8 435 aa8.33□□□□□ -1.08
SF3B3-214ENST00000572365 KIAA1107Q9UPP5 1409 aa8.32□□□□□ -1.08
SF3B3-214ENST00000572365 PTSQ03393 145 aa8.32□□□□□ -1.08
SF3B3-214ENST00000572365 NIF3L1Q9GZT8 377 aa8.32□□□□□ -1.08
SF3B3-214ENST00000572365 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
SF3B3-214ENST00000572365 KIAA1522Q9P206 1035 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-214ENST00000572365 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 GRNP28799 593 aaKnown RBP8.31□□□□□ -1.08
SF3B3-214ENST00000572365 EFHC2Q5JST6 749 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 XKR5Q6UX68 686 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 CEP63Q96MT8 703 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 C11orf16Q9NQ32 467 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
SF3B3-214ENST00000572365 KCNMB2Q9Y691 235 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 ERVK-7P63135 1459 aa8.31□□□□□ -1.08
SF3B3-214ENST00000572365 THBS1P07996 1170 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 EPB42P16452 691 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 MAPK8P45983 427 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 FGD1P98174 961 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 TRIP4Q15650 581 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-214ENST00000572365 ENOX2Q16206 610 aaKnown RBP8.3□□□□□ -1.08
SF3B3-214ENST00000572365 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 MRRFQ96E11 262 aaKnown RBP8.3□□□□□ -1.08
SF3B3-214ENST00000572365 TRIM47Q96LD4 638 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 USP20Q9Y2K6 914 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 MBD5Q9P267 1494 aa8.3□□□□□ -1.08
SF3B3-214ENST00000572365 EGFRP00533 1210 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 LDHBP07195 334 aaKnown RBP8.29□□□□□ -1.08
SF3B3-214ENST00000572365 ATF3P18847 181 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 VAMP1P23763 118 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 KCNQ4P56696 695 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 IDI1Q13907 227 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 PDE12Q6L8Q7 609 aaKnown RBP8.29□□□□□ -1.08
SF3B3-214ENST00000572365 FIGNL1Q6PIW4 674 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 CMTR1Q8N1G2 835 aaKnown RBP8.29□□□□□ -1.08
SF3B3-214ENST00000572365 BRD7Q9NPI1 651 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 SHPRHQ149N8 1683 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 PIK3C2BO00750 1634 aa8.29□□□□□ -1.08
SF3B3-214ENST00000572365 CCDC18Q5T9S5 1454 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 PLEKHH2Q8IVE3 1493 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 CDK12Q9NYV4 1490 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-214ENST00000572365 A6NHS1 94 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 EFSO43281 561 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 PRPF40AO75400 957 aaKnown RBP8.28□□□□□ -1.08
SF3B3-214ENST00000572365 NEFLP07196 543 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 UBAP2LQ14157 1087 aaKnown RBP8.28□□□□□ -1.08
SF3B3-214ENST00000572365 BRINP3Q76B58 766 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 ZCCHC2Q9C0B9 1178 aaKnown RBP8.28□□□□□ -1.08
SF3B3-214ENST00000572365 USP21Q9UK80 565 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 ABCC3O15438 1527 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 PRDM15P57071 1507 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-214ENST00000572365 CASKIN1Q8WXD9 1431 aa8.28□□□□□ -1.08
SF3B3-214ENST00000572365 LRRC9Q6ZRR7 1453 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 TMEM2Q9UHN6 1383 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.27□□□□□ -1.09
SF3B3-214ENST00000572365 YY1P25490 414 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 CCDC155Q8N6L0 562 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 CSRNP1Q96S65 589 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 PCDHGC4Q9Y5F7 938 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 TIAM1Q13009 1591 aa8.27□□□□□ -1.09
SF3B3-214ENST00000572365 CHD2O14647 1828 aaKnown RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 SLIT1O75093 1534 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 PNMA6FA0A0J9YX94 578 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 H7C1W4 665 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 EIF1AYO14602 144 aaKnown RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 ATXN7O15265 892 aaPredicted RBP8.26□□□□□ -1.09
SF3B3-214ENST00000572365 TNFRSF21O75509 655 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
SF3B3-214ENST00000572365 ORC1Q13415 861 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms