RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 USP21Q9UK80 565 aa8.08□□□□□ -1.12
KARSP3-201ENST00000571212 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 ASXL2Q76L83 1435 aa8.08□□□□□ -1.12
KARSP3-201ENST00000571212 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
KARSP3-201ENST00000571212 DEAF1O75398 565 aaPredicted RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 ARID4AP29374 1257 aaPredicted RBP8.08□□□□□ -1.12
KARSP3-201ENST00000571212 TTC9Q92623 222 aa8.08□□□□□ -1.12
KARSP3-201ENST00000571212 FBXO11Q86XK2 927 aa8.07□□□□□ -1.12
KARSP3-201ENST00000571212 GHRHP01286 108 aa8.06□□□□□ -1.12
KARSP3-201ENST00000571212 SOX18P35713 384 aa8.06□□□□□ -1.12
KARSP3-201ENST00000571212 TRIM33Q9UPN9 1127 aa8.06□□□□□ -1.12
KARSP3-201ENST00000571212 UACAQ9BZF9 1416 aa8.06□□□□□ -1.12
KARSP3-201ENST00000571212 TTBK1Q5TCY1 1321 aaPredicted RBP8.05□□□□□ -1.12
KARSP3-201ENST00000571212 DYRK3O43781 588 aa8.05□□□□□ -1.12
KARSP3-201ENST00000571212 XP32Q5T750 250 aa8.05□□□□□ -1.12
KARSP3-201ENST00000571212 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
KARSP3-201ENST00000571212 IL22RA1Q8N6P7 574 aa8.05□□□□□ -1.12
KARSP3-201ENST00000571212 DISP1Q96F81 1524 aa8.05□□□□□ -1.12
KARSP3-201ENST00000571212 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 CYP2E1P05181 493 aaPredicted RBP8.04□□□□□ -1.12
KARSP3-201ENST00000571212 NRG1Q02297 640 aaPredicted RBP8.04□□□□□ -1.12
KARSP3-201ENST00000571212 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 OR13H1Q8NG92 308 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 FAM13BQ9NYF5 915 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 KDM5BQ9UGL1 1544 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 MAP3K4Q9Y6R4 1608 aa8.04□□□□□ -1.12
KARSP3-201ENST00000571212 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 ATP11AP98196 1134 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 EPRSP07814 1512 aaKnown RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 UGGT2Q9NYU1 1516 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 IREB2P48200 963 aaKnown RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 TTC39BQ5VTQ0 682 aaPredicted RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 ADAMTSL4Q6UY14 1074 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 Q8N3U1 123 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 WFDC12Q8WWY7 111 aa8.03□□□□□ -1.12
KARSP3-201ENST00000571212 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
KARSP3-201ENST00000571212 ZCCHC11Q5TAX3 1644 aaKnown RBP8.02□□□□□ -1.13
KARSP3-201ENST00000571212 ADGRL1O94910 1474 aa8.02□□□□□ -1.13
KARSP3-201ENST00000571212 TEX14Q8IWB6 1497 aa8.02□□□□□ -1.13
KARSP3-201ENST00000571212 NOS3P29474 1203 aa8.02□□□□□ -1.13
KARSP3-201ENST00000571212 TP53INP1Q96A56 240 aa8.02□□□□□ -1.13
KARSP3-201ENST00000571212 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
KARSP3-201ENST00000571212 COL17A1Q9UMD9 1497 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 RAPGEF2Q9Y4G8 1499 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 KIAA0556O60303 1618 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 A6NHS1 94 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 DLL1O00548 723 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 SSFA2P28290 1259 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 FOXD4L6Q3SYB3 417 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 FOXD4L3Q6VB84 417 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 GTF3C2Q8WUA4 911 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 EDEM1Q92611 657 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 LACRTQ9GZZ8 138 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 RBSNQ9H1K0 784 aa8.01□□□□□ -1.13
KARSP3-201ENST00000571212 ABI2Q9NYB9 513 aaPredicted RBP8.01□□□□□ -1.13
KARSP3-201ENST00000571212 ALX3O95076 343 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 MPSTP25325 297 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
KARSP3-201ENST00000571212 HYAL2Q12891 473 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 SETDB1Q15047 1291 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 PRSS36Q5K4E3 855 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 ZMYM1Q5SVZ6 1142 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 CEP135Q66GS9 1140 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 TXNDC11Q6PKC3 985 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 IGF2-ASQ6U949 168 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 C14orf37Q86TY3 774 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 HELQQ8TDG4 1101 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 GGNBP2Q9H3C7 697 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 CNTN3Q9P232 1028 aa8□□□□□ -1.13
KARSP3-201ENST00000571212 CDC25BP30305 580 aa7.99□□□□□ -1.13
KARSP3-201ENST00000571212 MEGF10Q96KG7 1140 aa7.99□□□□□ -1.13
KARSP3-201ENST00000571212 ELP3Q9H9T3 547 aa7.99□□□□□ -1.13
KARSP3-201ENST00000571212 KANSL3Q9P2N6 904 aa7.99□□□□□ -1.13
KARSP3-201ENST00000571212 NOM1Q5C9Z4 860 aaKnown RBP7.98□□□□□ -1.13
KARSP3-201ENST00000571212 PHLDB3Q6NSJ2 640 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 SPACA7Q96KW9 195 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 CTTNBP2Q8WZ74 1663 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 WDR7Q9Y4E6 1490 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 ACPPP15309 386 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 EIF1AXP47813 144 aaKnown RBP7.98□□□□□ -1.13
KARSP3-201ENST00000571212 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 ZNF438Q7Z4V0 828 aa7.98□□□□□ -1.13
KARSP3-201ENST00000571212 CFAP43Q8NDM7 1665 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 PPP1R15AO75807 674 aaPredicted RBP7.97□□□□□ -1.13
KARSP3-201ENST00000571212 KIF4AO95239 1232 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 PDGFAP04085 211 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 PDE12Q6L8Q7 609 aaKnown RBP7.97□□□□□ -1.13
KARSP3-201ENST00000571212 NCAPG2Q86XI2 1143 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 C1orf127Q8N9H9 656 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 PPME1Q9Y570 386 aa7.97□□□□□ -1.13
KARSP3-201ENST00000571212 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms