RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GMPSP49915 693 aaPredicted RBP15.91■□□□□ 0.14
CDT1-203ENST00000569140 OS9Q13438 667 aaPredicted RBP15.91■□□□□ 0.14
CDT1-203ENST00000569140 MTX1Q13505 466 aa15.91■□□□□ 0.14
CDT1-203ENST00000569140 UBE4AQ14139 1066 aa15.91■□□□□ 0.14
CDT1-203ENST00000569140 VPS37DQ86XT2 251 aa15.91■□□□□ 0.14
CDT1-203ENST00000569140 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
CDT1-203ENST00000569140 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
CDT1-203ENST00000569140 POTECB2RU33 542 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 CIAO1O76071 339 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 PDE8BO95263 885 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 IFIT1P09914 478 aaKnown RBP15.9■□□□□ 0.14
CDT1-203ENST00000569140 PUM3Q15397 648 aaKnown RBP15.9■□□□□ 0.14
CDT1-203ENST00000569140 ATG9AQ7Z3C6 839 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 COPRSQ9NQ92 184 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 CEP126Q9P2H0 1117 aa15.9■□□□□ 0.14
CDT1-203ENST00000569140 SCN4AP35499 1836 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 SLC5A1P13866 664 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 EPHX2P34913 555 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 IL15P40933 162 aaPredicted RBP15.89■□□□□ 0.13
CDT1-203ENST00000569140 GYG1P46976 350 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 SCNN1DP51172 638 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 ATP8B2P98198 1209 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 G3BP1Q13283 466 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDT1-203ENST00000569140 TAF1DQ9H5J8 278 aaPredicted RBP15.89■□□□□ 0.13
CDT1-203ENST00000569140 FBXO3Q9UK99 471 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 CLEC11AQ9Y240 323 aa15.89■□□□□ 0.13
CDT1-203ENST00000569140 USP17L3A6NCW0 530 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 USP17L4A6NCW7 530 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 FRAT2O75474 233 aaPredicted RBP15.88■□□□□ 0.13
CDT1-203ENST00000569140 TOMM70O94826 608 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 EPS15P42566 896 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 CEP85Q6P2H3 762 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 USP17L1Q7RTZ2 530 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 VGLL2Q8N8G2 317 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 CD209Q9NNX6 404 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 GPRC5DQ9NZD1 345 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 JAG2Q9Y219 1238 aa15.88■□□□□ 0.13
CDT1-203ENST00000569140 SCN9AQ15858 1988 aa15.87■□□□□ 0.13
CDT1-203ENST00000569140 SURF6O75683 361 aaKnown RBP15.87■□□□□ 0.13
CDT1-203ENST00000569140 HIBADHP31937 336 aaKnown RBP15.87■□□□□ 0.13
CDT1-203ENST00000569140 GTF2IP78347 998 aa15.87■□□□□ 0.13
CDT1-203ENST00000569140 ATP2B3Q16720 1220 aa15.87■□□□□ 0.13
CDT1-203ENST00000569140 C15orf52Q6ZUT6 534 aaKnown RBP15.87■□□□□ 0.13
CDT1-203ENST00000569140 MICALL2Q8IY33 904 aa15.87■□□□□ 0.13
CDT1-203ENST00000569140 IQSEC3Q9UPP2 1182 aaPredicted RBP15.87■□□□□ 0.13
CDT1-203ENST00000569140 SHTN1A0MZ66 631 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 H7C1D1 291 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 C1QTNF8P60827 252 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 TFCP2Q12800 502 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 POLA2Q14181 598 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 TTLL5Q6EMB2 1281 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 RSBN1LQ6PCB5 846 aaPredicted RBP15.86■□□□□ 0.13
CDT1-203ENST00000569140 PNMA8AQ86V59 439 aaPredicted RBP15.86■□□□□ 0.13
CDT1-203ENST00000569140 MXD3Q9BW11 206 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 CNOT7Q9UIV1 285 aaKnown RBP15.86■□□□□ 0.13
CDT1-203ENST00000569140 IRS2Q9Y4H2 1338 aa15.86■□□□□ 0.13
CDT1-203ENST00000569140 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 POTEIP0CG38 1075 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 POTEJP0CG39 1038 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 RPS12P25398 132 aaKnown RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 CHAF1AQ13111 956 aaPredicted RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 SMC1BQ8NDV3 1235 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 LPIN2Q92539 896 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 BCL11AQ9H165 835 aa15.85■□□□□ 0.13
CDT1-203ENST00000569140 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
CDT1-203ENST00000569140 PSME4Q14997 1843 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 HMMRO75330 724 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 BCAMP50895 628 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 STRIP1Q5VSL9 837 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 FAM84BQ96KN1 310 aaPredicted RBP15.84■□□□□ 0.13
CDT1-203ENST00000569140 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 AKAP2Q9Y2D5 859 aa15.84■□□□□ 0.13
CDT1-203ENST00000569140 F8W031 263 aaPredicted RBP15.83■□□□□ 0.12
CDT1-203ENST00000569140 APBB1O00213 710 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 IL1R1P14778 569 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 FGFR2P21802 821 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.12
CDT1-203ENST00000569140 DACT2Q5SW24 774 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 AGBL3Q8NEM8 1001 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 CRBNQ96SW2 442 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 MYO3BQ8WXR4 1341 aa15.83■□□□□ 0.12
CDT1-203ENST00000569140 GORABQ5T7V8 394 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 USP50Q70EL3 339 aaPredicted RBP15.82■□□□□ 0.12
CDT1-203ENST00000569140 SAMD7Q7Z3H4 446 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 KIAA0825Q8IV33 1275 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 RPAP2Q8IXW5 612 aaPredicted RBP15.82■□□□□ 0.12
CDT1-203ENST00000569140 DPF2Q92785 391 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
CDT1-203ENST00000569140 SUPT16HQ9Y5B9 1047 aaKnown RBP15.82■□□□□ 0.12
CDT1-203ENST00000569140 A0A1B0GUL7 405 aa15.81■□□□□ 0.12
CDT1-203ENST00000569140 ZNF609O15014 1411 aa15.81■□□□□ 0.12
CDT1-203ENST00000569140 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms