RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 HYPKQ9NX55 129 aa6.42□□□□□ -1.38
LINC01541-202ENST00000568095 BTBD11A6QL63 1104 aa6.42□□□□□ -1.38
LINC01541-202ENST00000568095 SGSM2O43147 1006 aa6.42□□□□□ -1.38
LINC01541-202ENST00000568095 ZRANB2O95218 330 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC01541-202ENST00000568095 UNC5CLQ8IV45 518 aa6.42□□□□□ -1.38
LINC01541-202ENST00000568095 FIBPO43427 364 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CCT4P50991 539 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 PIP4K2BP78356 416 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 BMS1Q14692 1282 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 FOXD4L6Q3SYB3 417 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 FOXD4L3Q6VB84 417 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 TTC6Q86TZ1 520 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 LRRCC1Q9C099 1032 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CLSTN2Q9H4D0 955 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 MYH3P11055 1940 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 PRAMEF22A3QJZ6 481 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 HNRNPH2P55795 449 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CCZ1BP86790 482 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CCZ1P86791 482 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 IQCB1Q15051 598 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 TPD52L1Q16890 204 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 NFATC2IPQ8NCF5 419 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 FAM212AQ96EL1 285 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 TM6SF1Q9BZW5 370 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 NUP62CLQ9H1M0 184 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 EFCC1Q9HA90 598 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 A0A1B0GUL6 1792 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 USP42Q9H9J4 1324 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SPDYE2BA6NHP3 402 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 USP27XA6NNY8 438 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 KIF2AO00139 706 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SLU7O95391 586 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SPDYE6P0CI01 402 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CSB-PGBD3P0DP91 1061 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 LIG1P18858 919 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 HSPA1LP34931 641 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 PLA2G4AP47712 749 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 KCNJ6P48051 423 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 ATP8B2P98198 1209 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SPDYE2Q495Y8 402 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 ANO6Q4KMQ2 910 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 VPS53Q5VIR6 699 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 ZSCAN31Q96LW9 406 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 CDCA7Q9BWT1 371 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 YY1AP1Q9H869 796 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SH2B1Q9NRF2 756 aaPredicted RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 DDX19AQ9NUU7 478 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 SMC3Q9UQE7 1217 aa6.41□□□□□ -1.38
LINC01541-202ENST00000568095 DDX60Q8IY21 1712 aaKnown RBP6.41□□□□□ -1.38
LINC01541-202ENST00000568095 LARGE1O95461 756 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 GJB2P29033 226 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 RASEFQ8IZ41 740 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 CCAR2Q8N163 923 aaKnown RBP6.4□□□□□ -1.38
LINC01541-202ENST00000568095 ZNF526Q8TF50 670 aaPredicted RBP6.4□□□□□ -1.38
LINC01541-202ENST00000568095 NOL10Q9BSC4 688 aaKnown RBP6.4□□□□□ -1.38
LINC01541-202ENST00000568095 ST7Q9NRC1 585 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 STRN4Q9NRL3 753 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 UBR3Q6ZT12 1888 aa6.4□□□□□ -1.38
LINC01541-202ENST00000568095 ATP8B1O43520 1251 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 TUBB4AP04350 444 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 GNAI2P04899 355 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 ELF2Q15723 593 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 RBM26Q5T8P6 1007 aaKnown RBP6.4□□□□□ -1.39
LINC01541-202ENST00000568095 CCDC30Q5VVM6 783 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 NOL8Q76FK4 1167 aaKnown RBP6.4□□□□□ -1.39
LINC01541-202ENST00000568095 PI4K2BQ8TCG2 481 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 ALDH8A1Q9H2A2 487 aaPredicted RBP6.4□□□□□ -1.39
LINC01541-202ENST00000568095 ZSWIM6Q9HCJ5 1215 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 CLIP2Q9UDT6 1046 aa6.4□□□□□ -1.39
LINC01541-202ENST00000568095 COL15A1P39059 1388 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 TEFQ10587 303 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 IRF5Q13568 498 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 PROSER3Q2NL68 480 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 TSHZ3Q63HK5 1081 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 TMED8Q6PL24 325 aaPredicted RBP6.39□□□□□ -1.39
LINC01541-202ENST00000568095 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
LINC01541-202ENST00000568095 LRP5O75197 1615 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 KRT85P78386 507 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 UTYO14607 1347 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 QSER1Q2KHR3 1735 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 PNMA6AP0CW24 399 aaPredicted RBP6.39□□□□□ -1.39
LINC01541-202ENST00000568095 NOP2P46087 812 aaKnown RBP6.39□□□□□ -1.39
LINC01541-202ENST00000568095 SLC39A6Q13433 755 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 IQUBQ8NA54 791 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 SLC4A9Q96Q91 983 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 TRIM5Q9C035 493 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 OSBPL5Q9H0X9 879 aaPredicted RBP6.39□□□□□ -1.39
LINC01541-202ENST00000568095 TNMDQ9H2S6 317 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 CHPF2Q9P2E5 772 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 EXOC6BQ9Y2D4 811 aa6.39□□□□□ -1.39
LINC01541-202ENST00000568095 PNMA6EA0A0J9YXQ4 647 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 CLCN6P51797 869 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
LINC01541-202ENST00000568095 PIGBQ92521 554 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 SCAND2PQ9GZW5 306 aaPredicted RBP6.38□□□□□ -1.39
LINC01541-202ENST00000568095 SNRKQ9NRH2 765 aa6.38□□□□□ -1.39
LINC01541-202ENST00000568095 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms