RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MKRN1Q9UHC7 482 aaKnown RBP7.43□□□□□ -1.22
SF3B3-210ENST00000567654 COL16A1Q07092 1604 aaPredicted RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 PARP4Q9UKK3 1724 aaKnown RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 EXOSC9Q06265 439 aaKnown RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 USP4Q13107 963 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 MRPL14Q6P1L8 145 aaKnown RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 ARHGEF25Q86VW2 580 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 CRIPAKQ8N1N5 446 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 IP6K1Q92551 441 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 LRRC59Q96AG4 307 aaKnown RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 BCL2L13Q9BXK5 485 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 PNNQ9H307 717 aaKnown RBP7.42□□□□□ -1.22
SF3B3-210ENST00000567654 ATP13A2Q9NQ11 1180 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 SERPINA10Q9UK55 444 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 KIAA1024Q9UPX6 916 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 IL16Q14005 1332 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 CRB1P82279 1406 aa7.42□□□□□ -1.22
SF3B3-210ENST00000567654 COL22A1Q8NFW1 1626 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-210ENST00000567654 C5P01031 1676 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 PHLPP1O60346 1717 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 ATP5J2-PTCD1G3V325 749 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 GCP02774 474 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 RARSP54136 660 aaKnown RBP7.41□□□□□ -1.22
SF3B3-210ENST00000567654 GTF2IP78347 998 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 CLDN10P78369 228 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 MTHFSDQ2M296 383 aaKnown RBP7.41□□□□□ -1.22
SF3B3-210ENST00000567654 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 ZNF594Q96JF6 807 aaPredicted RBP7.41□□□□□ -1.22
SF3B3-210ENST00000567654 ZFP42Q96MM3 310 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 ARHGEF10LQ9HCE6 1279 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 NOD1Q9Y239 953 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 SPATA31A3Q5VYP0 1347 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 ABCC6O95255 1503 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 PLCH1Q4KWH8 1693 aa7.41□□□□□ -1.22
SF3B3-210ENST00000567654 POTECB2RU33 542 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 MEN1O00255 615 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 ZNF853P0CG23 659 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 BMP2P12643 396 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 PTGIRP43119 386 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 MCM10Q7L590 875 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 KCNH5Q8NCM2 988 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 INSM2Q96T92 566 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-210ENST00000567654 MYH16Q9H6N6 1097 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 GMPR2Q9P2T1 348 aaKnown RBP7.4□□□□□ -1.22
SF3B3-210ENST00000567654 LAS1LQ9Y4W2 734 aaKnown RBP7.4□□□□□ -1.22
SF3B3-210ENST00000567654 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 NPHP3Q7Z494 1330 aa7.4□□□□□ -1.22
SF3B3-210ENST00000567654 AHDC1Q5TGY3 1603 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-210ENST00000567654 NRAPQ86VF7 1730 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 TOGARAM1Q9Y4F4 1720 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 SOS2Q07890 1332 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-210ENST00000567654 SOBPA7XYQ1 873 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 CTSOP43234 321 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-210ENST00000567654 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
SF3B3-210ENST00000567654 CRTC2Q53ET0 693 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-210ENST00000567654 CYP2U1Q7Z449 544 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 CCDC125Q86Z20 511 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 TSPYL6Q8N831 410 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 ETNK1Q9HBU6 452 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 MBIPQ9NS73 344 aa7.39□□□□□ -1.23
SF3B3-210ENST00000567654 ITGB4P16144 1822 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 MEGF6O75095 1541 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 A0A1W2PRU2 124 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 ZBTB7BO15156 539 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-210ENST00000567654 NEFMP07197 916 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 RLBP1P12271 317 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 RASA1P20936 1047 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 KRT24Q2M2I5 525 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 PANK1Q8TE04 598 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 ANKRD24Q8TF21 1146 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 TSEN34Q9BSV6 310 aaKnown RBP7.38□□□□□ -1.23
SF3B3-210ENST00000567654 VRTNQ9H8Y1 702 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 IFT57Q9NWB7 429 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 SLAIN2Q9P270 581 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 SERTAD1Q9UHV2 236 aa7.38□□□□□ -1.23
SF3B3-210ENST00000567654 KIAA0232Q92628 1395 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 FIGNL2A6NMB9 653 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 LGR5O75473 907 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 UPP2O95045 317 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 IL2RAP01589 272 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 SCNN1DP51172 638 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 SCARF1Q14162 830 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 CHRNA2Q15822 529 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 C8orf58Q8NAV2 365 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.37□□□□□ -1.23
SF3B3-210ENST00000567654 TPCN2Q8NHX9 752 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 CCDC136Q96JN2 1154 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 POLMQ9NP87 494 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-210ENST00000567654 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
SF3B3-210ENST00000567654 COL14A1Q05707 1796 aaKnown RBP7.37□□□□□ -1.23
SF3B3-210ENST00000567654 GLI3P10071 1580 aa7.37□□□□□ -1.23
SF3B3-210ENST00000567654 LAMB4A4D0S4 1761 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 UBR2Q8IWV8 1755 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 CPDO75976 1380 aa7.36□□□□□ -1.23
SF3B3-210ENST00000567654 MAP3K5Q99683 1374 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms