RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 MTX1Q13505 466 aa19.52■□□□□ 0.72
COMMD4-217ENST00000567195 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
COMMD4-217ENST00000567195 TXNRD3Q86VQ6 643 aa19.52■□□□□ 0.72
COMMD4-217ENST00000567195 KCNQ5Q9NR82 932 aa19.52■□□□□ 0.72
COMMD4-217ENST00000567195 KLRK1P26718 216 aa19.51■□□□□ 0.71
COMMD4-217ENST00000567195 EAPPQ56P03 285 aaPredicted RBP19.51■□□□□ 0.71
COMMD4-217ENST00000567195 ZNF804AQ7Z570 1209 aa19.51■□□□□ 0.71
COMMD4-217ENST00000567195 SIL1Q9H173 461 aa19.51■□□□□ 0.71
COMMD4-217ENST00000567195 GPRC5DQ9NZD1 345 aa19.51■□□□□ 0.71
COMMD4-217ENST00000567195 USP17L3A6NCW0 530 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 USP17L4A6NCW7 530 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 CIAO1O76071 339 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 PDE8BO95263 885 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 VIL1P09327 827 aaKnown RBP19.5■□□□□ 0.71
COMMD4-217ENST00000567195 RPS12P25398 132 aaKnown RBP19.5■□□□□ 0.71
COMMD4-217ENST00000567195 EPS15P42566 896 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 USP17L1Q7RTZ2 530 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 LDHDQ86WU2 507 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 DPF2Q92785 391 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 COPRSQ9NQ92 184 aa19.5■□□□□ 0.71
COMMD4-217ENST00000567195 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-217ENST00000567195 A0A1B0GUL6 1792 aa19.49■□□□□ 0.71
COMMD4-217ENST00000567195 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
COMMD4-217ENST00000567195 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
COMMD4-217ENST00000567195 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
COMMD4-217ENST00000567195 CD209Q9NNX6 404 aa19.49■□□□□ 0.71
COMMD4-217ENST00000567195 ADARB2Q9NS39 739 aaKnown RBP19.49■□□□□ 0.71
COMMD4-217ENST00000567195 DDX19BQ9UMR2 479 aa19.49■□□□□ 0.71
COMMD4-217ENST00000567195 CLEC11AQ9Y240 323 aa19.49■□□□□ 0.71
COMMD4-217ENST00000567195 H7C1D1 291 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 IL15P40933 162 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-217ENST00000567195 PDE3AQ14432 1141 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 RSBN1LQ6PCB5 846 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-217ENST00000567195 USP50Q70EL3 339 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-217ENST00000567195 ATG9AQ7Z3C6 839 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 FBXW7Q969H0 707 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 CEP126Q9P2H0 1117 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
COMMD4-217ENST00000567195 PA2G4Q9UQ80 394 aaKnown RBP19.48■□□□□ 0.71
COMMD4-217ENST00000567195 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 IRS2Q9Y4H2 1338 aa19.48■□□□□ 0.71
COMMD4-217ENST00000567195 STRIP1Q5VSL9 837 aa19.47■□□□□ 0.71
COMMD4-217ENST00000567195 VGLL2Q8N8G2 317 aa19.47■□□□□ 0.71
COMMD4-217ENST00000567195 C1orf115Q9H7X2 142 aa19.47■□□□□ 0.71
COMMD4-217ENST00000567195 IFIT1P09914 478 aaKnown RBP19.46■□□□□ 0.71
COMMD4-217ENST00000567195 POTEIP0CG38 1075 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 POTEJP0CG39 1038 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 HIBADHP31937 336 aaKnown RBP19.46■□□□□ 0.71
COMMD4-217ENST00000567195 ATP8B2P98198 1209 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 PUM3Q15397 648 aaKnown RBP19.46■□□□□ 0.71
COMMD4-217ENST00000567195 CAVIN4Q5BKX8 364 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 TTLL5Q6EMB2 1281 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 VPS37DQ86XT2 251 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 MICALL2Q8IY33 904 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 AGBL3Q8NEM8 1001 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 SCN9AQ15858 1988 aa19.46■□□□□ 0.71
COMMD4-217ENST00000567195 PNMA6EA0A0J9YXQ4 647 aa19.45■□□□□ 0.7
COMMD4-217ENST00000567195 IL1R1P14778 569 aa19.45■□□□□ 0.7
COMMD4-217ENST00000567195 SLC5A1P13866 664 aa19.44■□□□□ 0.7
COMMD4-217ENST00000567195 GYG1P46976 350 aa19.44■□□□□ 0.7
COMMD4-217ENST00000567195 GTF2IP78347 998 aa19.44■□□□□ 0.7
COMMD4-217ENST00000567195 LPIN2Q92539 896 aa19.44■□□□□ 0.7
COMMD4-217ENST00000567195 FAM84BQ96KN1 310 aaPredicted RBP19.44■□□□□ 0.7
COMMD4-217ENST00000567195 MYO3BQ8WXR4 1341 aa19.44■□□□□ 0.7
COMMD4-217ENST00000567195 FGFR2P21802 821 aa19.43■□□□□ 0.7
COMMD4-217ENST00000567195 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■□□□□ 9.5
COMMD4-217ENST00000567195 DACT2Q5SW24 774 aa19.43■□□□□ 0.7
COMMD4-217ENST00000567195 PSME4Q14997 1843 aa19.43■□□□□ 0.7
COMMD4-217ENST00000567195 ZNF609O15014 1411 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 POLA2Q14181 598 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 ATP2B3Q16720 1220 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 C20orf194Q5TEA3 1177 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 SSH3Q8TE77 659 aa19.42■□□□□ 0.7
COMMD4-217ENST00000567195 SHTN1A0MZ66 631 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
COMMD4-217ENST00000567195 SASH1O94885 1247 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 USP17L8P0C7I0 530 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 RBM26Q5T8P6 1007 aaKnown RBP19.41■□□□□ 0.7
COMMD4-217ENST00000567195 FBXO33Q7Z6M2 555 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 OGFOD1Q8N543 542 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 TDRD7Q8NHU6 1098 aaKnown RBP19.41■□□□□ 0.7
COMMD4-217ENST00000567195 GMLQ99445 158 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 AKAP2Q9Y2D5 859 aa19.41■□□□□ 0.7
COMMD4-217ENST00000567195 MMP14P50281 582 aa19.4■□□□□ 0.7
COMMD4-217ENST00000567195 OS9Q13438 667 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-217ENST00000567195 TBC1D10BQ4KMP7 808 aaPredicted RBP19.4■□□□□ 0.7
COMMD4-217ENST00000567195 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
COMMD4-217ENST00000567195 SAMD7Q7Z3H4 446 aa19.4■□□□□ 0.7
COMMD4-217ENST00000567195 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
COMMD4-217ENST00000567195 MXD3Q9BW11 206 aa19.4■□□□□ 0.7
COMMD4-217ENST00000567195 ZBTB40Q9NUA8 1239 aa19.4■□□□□ 0.7
COMMD4-217ENST00000567195 SURF6O75683 361 aaKnown RBP19.39■□□□□ 0.69
COMMD4-217ENST00000567195 BCAMP50895 628 aa19.39■□□□□ 0.69
COMMD4-217ENST00000567195 RRP1P56182 461 aaKnown RBP19.39■□□□□ 0.69
COMMD4-217ENST00000567195 ZNF280AP59817 542 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-217ENST00000567195 FKBP1AP62942 108 aaKnown RBP19.39■□□□□ 0.69
COMMD4-217ENST00000567195 TFCP2Q12800 502 aa19.39■□□□□ 0.69
COMMD4-217ENST00000567195 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
COMMD4-217ENST00000567195 CNTROBQ8N137 903 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms