RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 HSPA1AP0DMV8 641 aaKnown RBP18.55■□□□□ 0.56
FANCA-220ENST00000566409 HSPA1BP0DMV9 641 aaKnown RBP18.55■□□□□ 0.56
FANCA-220ENST00000566409 DEFB115Q30KQ5 88 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 USP17L1Q7RTZ2 530 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 AGBL3Q8NEM8 1001 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 HELBQ8NG08 1087 aaPredicted RBP18.55■□□□□ 0.56
FANCA-220ENST00000566409 MXD3Q9BW11 206 aa18.55■□□□□ 0.56
FANCA-220ENST00000566409 ASTN2O75129 1339 aaPredicted RBP18.54■□□□□ 0.56
FANCA-220ENST00000566409 ZNF280AP59817 542 aaPredicted RBP18.54■□□□□ 0.56
FANCA-220ENST00000566409 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
FANCA-220ENST00000566409 CDC37L1Q7L3B6 337 aa18.54■□□□□ 0.56
FANCA-220ENST00000566409 USP48Q86UV5 1035 aa18.54■□□□□ 0.56
FANCA-220ENST00000566409 ABT1Q9ULW3 272 aaKnown RBP18.54■□□□□ 0.56
FANCA-220ENST00000566409 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
FANCA-220ENST00000566409 MIER1Q8N108 512 aa18.53■□□□□ 0.56
FANCA-220ENST00000566409 COA1Q9GZY4 146 aa18.53■□□□□ 0.56
FANCA-220ENST00000566409 CELF2O95319 508 aaKnown RBP18.52■□□□□ 0.56
FANCA-220ENST00000566409 CCDC57Q2TAC2 916 aa18.52■□□□□ 0.56
FANCA-220ENST00000566409 KIF4BQ2VIQ3 1234 aa18.52■□□□□ 0.56
FANCA-220ENST00000566409 USP44Q9H0E7 712 aa18.52■□□□□ 0.56
FANCA-220ENST00000566409 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.56
FANCA-220ENST00000566409 USP17L8P0C7I0 530 aa18.51■□□□□ 0.55
FANCA-220ENST00000566409 RABL6Q3YEC7 729 aaPredicted RBP18.51■□□□□ 0.55
FANCA-220ENST00000566409 COL13A1Q5TAT6 717 aaPredicted RBP18.51■□□□□ 0.55
FANCA-220ENST00000566409 LDHAL6AQ6ZMR3 332 aa18.51■□□□□ 0.55
FANCA-220ENST00000566409 ANKRD44Q8N8A2 993 aa18.51■□□□□ 0.55
FANCA-220ENST00000566409 BICC1Q9H694 974 aaKnown RBP18.51■□□□□ 0.55
FANCA-220ENST00000566409 SMC4Q9NTJ3 1288 aa18.51■□□□□ 0.55
FANCA-220ENST00000566409 WDR33Q9C0J8 1336 aaKnown RBP18.5■□□□□ 0.55
FANCA-220ENST00000566409 ADM5C9JUS6 153 aa18.5■□□□□ 0.55
FANCA-220ENST00000566409 STRIP1Q5VSL9 837 aa18.5■□□□□ 0.55
FANCA-220ENST00000566409 C15orf52Q6ZUT6 534 aaKnown RBP18.5■□□□□ 0.55
FANCA-220ENST00000566409 SAPCD2Q86UD0 394 aa18.5■□□□□ 0.55
FANCA-220ENST00000566409 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
FANCA-220ENST00000566409 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
FANCA-220ENST00000566409 KCNJ4P48050 445 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 SCARF1Q14162 830 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 KRT26Q7Z3Y9 468 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 ZNF408Q9H9D4 720 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 CD209Q9NNX6 404 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
FANCA-220ENST00000566409 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 DIEXFQ68CQ4 756 aaKnown RBP18.48■□□□□ 0.55
FANCA-220ENST00000566409 TTLL5Q6EMB2 1281 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 DCPSQ96C86 337 aaKnown RBP18.48■□□□□ 0.55
FANCA-220ENST00000566409 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 CNNM1Q9NRU3 951 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 GGA3Q9NZ52 723 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 NOB1Q9ULX3 412 aaKnown RBP18.48■□□□□ 0.55
FANCA-220ENST00000566409 THSD7BQ9C0I4 1608 aa18.48■□□□□ 0.55
FANCA-220ENST00000566409 PLIN1O60240 522 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 BRPF1P55201 1214 aaPredicted RBP18.47■□□□□ 0.55
FANCA-220ENST00000566409 GTF2IP78347 998 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 FBXW7Q969H0 707 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 WBP1LQ9NX94 342 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
FANCA-220ENST00000566409 FOXN1O15353 648 aa18.46■□□□□ 0.55
FANCA-220ENST00000566409 RARSP54136 660 aaKnown RBP18.46■□□□□ 0.55
FANCA-220ENST00000566409 NBPF9Q3BBW0 867 aa18.46■□□□□ 0.55
FANCA-220ENST00000566409 ANGEL2Q5VTE6 544 aaKnown RBP18.46■□□□□ 0.55
FANCA-220ENST00000566409 IL1R1P14778 569 aa18.45■□□□□ 0.54
FANCA-220ENST00000566409 LRRC24Q50LG9 513 aa18.45■□□□□ 0.54
FANCA-220ENST00000566409 CERS5Q8N5B7 392 aa18.45■□□□□ 0.54
FANCA-220ENST00000566409 KLHDC4Q8TBB5 520 aa18.45■□□□□ 0.54
FANCA-220ENST00000566409 SCAF8Q9UPN6 1271 aaKnown RBP18.45■□□□□ 0.54
FANCA-220ENST00000566409 MYO3BQ8WXR4 1341 aa18.45■□□□□ 0.54
FANCA-220ENST00000566409 GRM1Q13255 1194 aa18.44■□□□□ 0.54
FANCA-220ENST00000566409 PAXIP1Q6ZW49 1069 aaPredicted RBP18.44■□□□□ 0.54
FANCA-220ENST00000566409 KIAA0825Q8IV33 1275 aa18.44■□□□□ 0.54
FANCA-220ENST00000566409 HHIPL1Q96JK4 782 aa18.44■□□□□ 0.54
FANCA-220ENST00000566409 WNT10BO00744 389 aa18.43■□□□□ 0.54
FANCA-220ENST00000566409 AOC2O75106 756 aa18.43■□□□□ 0.54
FANCA-220ENST00000566409 ECE1P42892 770 aa18.43■□□□□ 0.54
FANCA-220ENST00000566409 SULF1Q8IWU6 871 aa18.43■□□□□ 0.54
FANCA-220ENST00000566409 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
FANCA-220ENST00000566409 UBE4AQ14139 1066 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 ZNF804AQ7Z570 1209 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 OGFOD1Q8N543 542 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 VGLL2Q8N8G2 317 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 CDCA5Q96FF9 252 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 ZBED3Q96IU2 234 aaPredicted RBP18.42■□□□□ 0.54
FANCA-220ENST00000566409 GBA2Q9HCG7 927 aaPredicted RBP18.42■□□□□ 0.54
FANCA-220ENST00000566409 JAG2Q9Y219 1238 aa18.42■□□□□ 0.54
FANCA-220ENST00000566409 GYG1P46976 350 aa18.41■□□□□ 0.54
FANCA-220ENST00000566409 HUNKP57058 714 aa18.41■□□□□ 0.54
FANCA-220ENST00000566409 FAM84BQ96KN1 310 aaPredicted RBP18.41■□□□□ 0.54
FANCA-220ENST00000566409 MROH5Q6ZUA9 1318 aa18.41■□□□□ 0.54
FANCA-220ENST00000566409 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
FANCA-220ENST00000566409 SASH1O94885 1247 aa18.4■□□□□ 0.54
FANCA-220ENST00000566409 MAP2K1Q02750 393 aaPredicted RBP18.4■□□□□ 0.54
FANCA-220ENST00000566409 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
FANCA-220ENST00000566409 ZIC5Q96T25 663 aa18.4■□□□□ 0.54
FANCA-220ENST00000566409 API5Q9BZZ5 524 aaKnown RBP18.4■□□□□ 0.54
FANCA-220ENST00000566409 PCDHAC2Q9Y5I4 1007 aa18.4■□□□□ 0.54
FANCA-220ENST00000566409 MAP2K2P36507 400 aa18.39■□□□□ 0.53
FANCA-220ENST00000566409 MMP14P50281 582 aa18.39■□□□□ 0.53
FANCA-220ENST00000566409 PRAMEF18Q5VWM3 479 aa18.39■□□□□ 0.53
FANCA-220ENST00000566409 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms