RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 NANOS1Q8WY41 292 aaKnown RBP7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 COG3Q96JB2 828 aa7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 COL25A1Q9BXS0 654 aaPredicted RBP7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 BTAF1O14981 1849 aa7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 USP47Q96K76 1375 aa7.42□□□□□ -1.22
AC055855.3-201ENST00000564269 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 ATP5J2-PTCD1G3V325 749 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 AMPHP49418 695 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 MSL1Q68DK7 614 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 PRICKLE2Q7Z3G6 844 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 TESK2Q96S53 571 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 CD2APQ9Y5K6 639 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 NDUFB9Q9Y6M9 179 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 MEGF6O75095 1541 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 SHANK3Q9BYB0 1731 aa7.41□□□□□ -1.22
AC055855.3-201ENST00000564269 RHOQP17081 205 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 SCTRP47872 440 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 RRS1Q15050 365 aaKnown RBP7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 LYSMD3Q7Z3D4 306 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 CGNL1Q0VF96 1302 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 ATP10DQ9P241 1426 aa7.4□□□□□ -1.22
AC055855.3-201ENST00000564269 COL24A1Q17RW2 1714 aa7.4□□□□□ -1.23
AC055855.3-201ENST00000564269 MEN1O00255 615 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 RNF144AP50876 292 aaPredicted RBP7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 ERVK-9P63128 1117 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 CC2D2BQ6DHV5 1058 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 SV2AQ7L0J3 742 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 AMIGO3Q86WK7 504 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
AC055855.3-201ENST00000564269 RTL1A6NKG5 1358 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 ADCY9O60503 1353 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 PALLDQ8WX93 1383 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 ST20-MTHFSA0A0A6YYL1 179 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 A0A1W2PRU2 124 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 FYB1O15117 783 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 HMGB2P26583 209 aaKnown RBP7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 HSP90AB2PQ58FF8 381 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 RNF20Q5VTR2 975 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 MPRIPQ6WCQ1 1025 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 RAPGEF4Q8WZA2 1011 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 PCDHB11Q9Y5F2 797 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 LTN1O94822 1766 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 QSER1Q2KHR3 1735 aa7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 FAM208AQ9UK61 1670 aaKnown RBP7.38□□□□□ -1.23
AC055855.3-201ENST00000564269 CHD4Q14839 1912 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 PCDH11XQ9BZA7 1347 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 PCDH11YQ9BZA8 1340 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 CYP27B1O15528 508 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 HSPA6P17066 643 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 MCCD1P59942 119 aaPredicted RBP7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 SMIM5Q71RC9 77 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 GGNBP2Q9H3C7 697 aa7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 ZNF330Q9Y3S2 320 aaPredicted RBP7.37□□□□□ -1.23
AC055855.3-201ENST00000564269 LY75O60449 1722 aa7.36□□□□□ -1.23
AC055855.3-201ENST00000564269 IGSF1Q8N6C5 1336 aa7.36□□□□□ -1.23
AC055855.3-201ENST00000564269 ZNF526Q8TF50 670 aaPredicted RBP7.36□□□□□ -1.23
AC055855.3-201ENST00000564269 PIGBQ92521 554 aa7.36□□□□□ -1.23
AC055855.3-201ENST00000564269 TBC1D2BQ9UPU7 963 aa7.36□□□□□ -1.23
AC055855.3-201ENST00000564269 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 INSRP06213 1382 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 APBB1O00213 710 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 SSFA2P28290 1259 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 CYP2U1Q7Z449 544 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 LINC00116Q8NCU8 138 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 WHAMMQ8TF30 809 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 SMARCC1Q92922 1105 aaPredicted RBP7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 OSBPL3Q9H4L5 887 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 WWC3Q9ULE0 1092 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 DOT1LQ8TEK3 1739 aa7.35□□□□□ -1.23
AC055855.3-201ENST00000564269 TONSLQ96HA7 1378 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 TUBGCP6Q96RT7 1819 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 TRAK2O60296 914 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 GPC1P35052 558 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 POU4F2Q12837 409 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 ZNF385CQ66K41 422 aaPredicted RBP7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 ZNF592Q92610 1267 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 CCDC85AQ96PX6 553 aaPredicted RBP7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 ARHGEF10LQ9HCE6 1279 aa7.34□□□□□ -1.23
AC055855.3-201ENST00000564269 FLT4P35916 1363 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 LOC102724428A0A0B4J2F2 783 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 SIK1P57059 783 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 TMF1P82094 1093 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 CLN3Q13286 438 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 ITPK1Q13572 414 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 RAB6BQ9NRW1 208 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 CEP126Q9P2H0 1117 aa7.33□□□□□ -1.24
AC055855.3-201ENST00000564269 SLURP2P0DP57 97 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 GAS6Q14393 721 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 RIPOR1Q6ZS17 1223 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 SVOPQ8N4V2 548 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 DNAJC5GQ8N7S2 189 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 ZNF837Q96EG3 531 aaPredicted RBP7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
AC055855.3-201ENST00000564269 ASAP1Q9ULH1 1129 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms