RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
SCAMP2-204ENST00000563829 ERCC6L2Q5T890 1561 aa14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 MAP2K7O14733 419 aa14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 CORO7P57737 925 aa14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 MTHFSDQ2M296 383 aaKnown RBP14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 MRPS27Q92552 414 aaKnown RBP14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.12
SCAMP2-204ENST00000563829 MAP3K5Q99683 1374 aa14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 NEXMIFQ5QGS0 1516 aa14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 KARSQ15046 597 aaKnown RBP14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 Q6ZUG5 572 aa14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 CCDC12Q8WUD4 166 aaPredicted RBP14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.13
SCAMP2-204ENST00000563829 SF3A1Q15459 793 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 HSP90AA4PQ58FG1 418 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 FMR1NBQ8N0W7 255 aaPredicted RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 GPATCH3Q96I76 525 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 TOP1P11387 765 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 HSP90B2PQ58FF3 399 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 JAKMIP3Q5VZ66 844 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 LRRC31Q6UY01 552 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 HDXQ7Z353 690 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 AACSQ86V21 672 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 FSD1Q9BTV5 496 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 SLC3A2P08195 630 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 DHX8Q14562 1220 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 NCAPHQ15003 741 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 TTLL5Q6EMB2 1281 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
SCAMP2-204ENST00000563829 TMEM232C9JQI7 657 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 CLGNO14967 610 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 EIF3JO75822 258 aaKnown RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 CHMP4BP1P59074 171 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 SCRN1Q12765 414 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 BRD3Q15059 726 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 HSP90AB4PQ58FF6 505 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 CCDC91Q7Z6B0 441 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 CNNM3Q8NE01 707 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 IRX2Q9BZI1 471 aaPredicted RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 CCT2P78371 535 aaKnown RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 ZNF589Q86UQ0 364 aaPredicted RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 MKRN1Q9UHC7 482 aaKnown RBP14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
SCAMP2-204ENST00000563829 TOGARAM2Q6ZUX3 1019 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 BOLA2Q9H3K6 86 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 CCDC8Q9H0W5 538 aaPredicted RBP14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 CXorf56Q9H5V9 222 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 ABCB6Q9NP58 842 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 ARHGAP6O43182 974 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 RHOXF2BP0C7M4 288 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 MCTP2Q6DN12 878 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 MMS22LQ6ZRQ5 1243 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 NEK1Q96PY6 1258 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 PNKPQ96T60 521 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 RHOXF2Q9BQY4 288 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 HECW2Q9P2P5 1572 aa14.24□□□□□ -0.13
SCAMP2-204ENST00000563829 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 CCDC172P0C7W6 258 aa14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 DNAAF4Q8WXU2 420 aa14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 EDC4Q6P2E9 1401 aaKnown RBP14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 NLRP12P59046 1061 aa14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 BAG1Q99933 345 aaPredicted RBP14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 FAM204AQ9H8W3 233 aa14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 CEP83Q9Y592 693 aa14.23□□□□□ -0.13
SCAMP2-204ENST00000563829 MNAT1P51948 309 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 STK38Q15208 465 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 TADA2BQ86TJ2 420 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 KIFC2Q96AC6 838 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 BPIFA3Q9BQP9 254 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 ANKZF1Q9H8Y5 726 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 NPHP4O75161 1426 aaPredicted RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 USP42Q9H9J4 1324 aaKnown RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 ERLIN1O75477 346 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 RPS6KA5O75582 802 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 ADKP55263 362 aaKnown RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 MTX1Q13505 466 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 EFCAB13Q8IY85 973 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 NCOA5Q9HCD5 579 aaKnown RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 SETD1AO15047 1707 aaKnown RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 POLR3DP05423 398 aaPredicted RBP14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 HDGFL1Q5TGJ6 251 aa14.22□□□□□ -0.13
SCAMP2-204ENST00000563829 LIG3P49916 1009 aa14.21□□□□□ -0.13
SCAMP2-204ENST00000563829 ADALQ6DHV7 355 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms