RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 SP3Q02447 781 aa23.68■■□□□ 1.38
E4F1-203ENST00000563643 SLC9C1Q4G0N8 1177 aa23.68■■□□□ 1.38
E4F1-203ENST00000563643 OGFOD1Q8N543 542 aa23.68■■□□□ 1.38
E4F1-203ENST00000563643 SLC10A4Q96EP9 437 aa23.68■■□□□ 1.38
E4F1-203ENST00000563643 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.68■■□□□ 1.38
E4F1-203ENST00000563643 PODNQ7Z5L7 613 aa23.67■■□□□ 1.38
E4F1-203ENST00000563643 NBPF11Q86T75 865 aa23.67■■□□□ 1.38
E4F1-203ENST00000563643 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
E4F1-203ENST00000563643 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
E4F1-203ENST00000563643 SASH1O94885 1247 aa23.66■■□□□ 1.38
E4F1-203ENST00000563643 RTL5Q5HYW3 569 aaPredicted RBP23.66■■□□□ 1.38
E4F1-203ENST00000563643 WNK4Q96J92 1243 aa23.66■■□□□ 1.38
E4F1-203ENST00000563643 NEFMP07197 916 aa23.65■■□□□ 1.38
E4F1-203ENST00000563643 APOBEC3FQ8IUX4 373 aaKnown RBP23.65■■□□□ 1.38
E4F1-203ENST00000563643 CLMNQ96JQ2 1002 aa23.65■■□□□ 1.38
E4F1-203ENST00000563643 PTCH2Q9Y6C5 1203 aa23.65■■□□□ 1.38
E4F1-203ENST00000563643 MYCP01106 439 aaPredicted RBP23.64■■□□□ 1.37
E4F1-203ENST00000563643 MNX1P50219 401 aaPredicted RBP23.64■■□□□ 1.37
E4F1-203ENST00000563643 OTUD7BQ6GQQ9 843 aa23.64■■□□□ 1.37
E4F1-203ENST00000563643 MXD3Q9BW11 206 aa23.64■■□□□ 1.37
E4F1-203ENST00000563643 SEC31BQ9NQW1 1179 aa23.64■■□□□ 1.37
E4F1-203ENST00000563643 LAMB1P07942 1786 aa23.63■■□□□ 1.37
E4F1-203ENST00000563643 IRS4O14654 1257 aaPredicted RBP23.63■■□□□ 1.37
E4F1-203ENST00000563643 PPP2R1AP30153 589 aa23.63■■□□□ 1.37
E4F1-203ENST00000563643 ISCA1Q9BUE6 129 aa23.63■■□□□ 1.37
E4F1-203ENST00000563643 MAP3K11Q16584 847 aa23.62■■□□□ 1.37
E4F1-203ENST00000563643 DACT2Q5SW24 774 aa23.62■■□□□ 1.37
E4F1-203ENST00000563643 PRO3102Q9H379 93 aa23.62■■□□□ 1.37
E4F1-203ENST00000563643 XDHP47989 1333 aa23.61■■□□□ 1.37
E4F1-203ENST00000563643 ATP5J2-PTCD1G3V325 749 aa23.61■■□□□ 1.37
E4F1-203ENST00000563643 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
E4F1-203ENST00000563643 DPF3Q92784 378 aa23.61■■□□□ 1.37
E4F1-203ENST00000563643 COL1A1P02452 1464 aaPredicted RBP23.61■■□□□ 1.37
E4F1-203ENST00000563643 MYO3BQ8WXR4 1341 aa23.6■■□□□ 1.37
E4F1-203ENST00000563643 PTPN18Q99952 460 aa23.6■■□□□ 1.37
E4F1-203ENST00000563643 SSC5DA1L4H1 1573 aa23.6■■□□□ 1.37
E4F1-203ENST00000563643 ARHGEF6Q15052 776 aa23.59■■□□□ 1.37
E4F1-203ENST00000563643 PLBD2Q8NHP8 589 aa23.59■■□□□ 1.37
E4F1-203ENST00000563643 FBXW7Q969H0 707 aa23.58■■□□□ 1.37
E4F1-203ENST00000563643 DEFB129Q9H1M3 183 aa23.58■■□□□ 1.37
E4F1-203ENST00000563643 UNC80Q8N2C7 3258 aa23.57■■□□□ 1.36
E4F1-203ENST00000563643 WTIPA6NIX2 430 aaPredicted RBP23.57■■□□□ 1.36
E4F1-203ENST00000563643 PPP1R12BO60237 982 aaPredicted RBP23.57■■□□□ 1.36
E4F1-203ENST00000563643 ATP2B4P23634 1241 aa23.57■■□□□ 1.36
E4F1-203ENST00000563643 GJA5P36382 358 aa23.57■■□□□ 1.36
E4F1-203ENST00000563643 SH3TC2Q8TF17 1288 aa23.57■■□□□ 1.36
E4F1-203ENST00000563643 PLEKHF1Q96S99 279 aa23.57■■□□□ 1.36
E4F1-203ENST00000563643 MED23Q9ULK4 1368 aa23.56■■□□□ 1.36
E4F1-203ENST00000563643 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
E4F1-203ENST00000563643 UNCXA6NJT0 531 aa23.56■■□□□ 1.36
E4F1-203ENST00000563643 STRIP1Q5VSL9 837 aa23.56■■□□□ 1.36
E4F1-203ENST00000563643 ZNF646O15015 1829 aaPredicted RBP23.56■■□□□ 1.36
E4F1-203ENST00000563643 TESPA1A2RU30 521 aaPredicted RBP23.55■■□□□ 1.36
E4F1-203ENST00000563643 MMP14P50281 582 aa23.55■■□□□ 1.36
E4F1-203ENST00000563643 RALBP1Q15311 655 aa23.55■■□□□ 1.36
E4F1-203ENST00000563643 ANKRD13DQ6ZTN6 518 aa23.55■■□□□ 1.36
E4F1-203ENST00000563643 SHISA4Q96DD7 197 aa23.55■■□□□ 1.36
E4F1-203ENST00000563643 CHPF2Q9P2E5 772 aa23.55■■□□□ 1.36
E4F1-203ENST00000563643 CCDC152Q4G0S7 254 aa23.54■■□□□ 1.36
E4F1-203ENST00000563643 ZBED3Q96IU2 234 aaPredicted RBP23.54■■□□□ 1.36
E4F1-203ENST00000563643 SOX1O00570 391 aaPredicted RBP23.53■■□□□ 1.36
E4F1-203ENST00000563643 KIAA0825Q8IV33 1275 aa23.53■■□□□ 1.36
E4F1-203ENST00000563643 TRIM28Q13263 835 aaKnown RBP23.52■■□□□ 1.36
E4F1-203ENST00000563643 LRCH3Q96II8 777 aa23.52■■□□□ 1.36
E4F1-203ENST00000563643 BABAM1Q9NWV8 329 aa23.52■■□□□ 1.36
E4F1-203ENST00000563643 PPP2R3BQ9Y5P8 575 aa23.52■■□□□ 1.36
E4F1-203ENST00000563643 A0A1W2PPC1 479 aa23.51■■□□□ 1.35
E4F1-203ENST00000563643 HSP90B1P14625 803 aaKnown RBP23.51■■□□□ 1.35
E4F1-203ENST00000563643 ANKRD18AQ8IVF6 992 aa23.51■■□□□ 1.35
E4F1-203ENST00000563643 ZBTB38Q8NAP3 1195 aaPredicted RBP23.51■■□□□ 1.35
E4F1-203ENST00000563643 CCDC85AQ96PX6 553 aaPredicted RBP23.51■■□□□ 1.35
E4F1-203ENST00000563643 HTATIP2Q9BUP3 242 aa23.5■■□□□ 1.35
E4F1-203ENST00000563643 COA1Q9GZY4 146 aa23.5■■□□□ 1.35
E4F1-203ENST00000563643 IREB2P48200 963 aaKnown RBP23.49■■□□□ 1.35
E4F1-203ENST00000563643 TAF1CQ15572 869 aaPredicted RBP23.49■■□□□ 1.35
E4F1-203ENST00000563643 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
E4F1-203ENST00000563643 SUPT20HL1Q3ZLR7 823 aa23.49■■□□□ 1.35
E4F1-203ENST00000563643 ZFYVE28Q9HCC9 887 aa23.49■■□□□ 1.35
E4F1-203ENST00000563643 MAPK8IP3Q9UPT6 1336 aa23.49■■□□□ 1.35
E4F1-203ENST00000563643 ANKRD13AQ8IZ07 590 aa23.48■■□□□ 1.35
E4F1-203ENST00000563643 OPTNQ96CV9 577 aa23.48■■□□□ 1.35
E4F1-203ENST00000563643 MS4A4AQ96JQ5 239 aa23.48■■□□□ 1.35
E4F1-203ENST00000563643 NR2E3Q9Y5X4 410 aa23.48■■□□□ 1.35
E4F1-203ENST00000563643 TTLL5Q6EMB2 1281 aa23.47■■□□□ 1.35
E4F1-203ENST00000563643 UBE2Q1Q7Z7E8 422 aa23.47■■□□□ 1.35
E4F1-203ENST00000563643 ZNF804BA4D1E1 1349 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 PDE8AO60658 829 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 USP2O75604 605 aaPredicted RBP23.46■■□□□ 1.35
E4F1-203ENST00000563643 MTFR1Q15390 333 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 DLGAP5Q15398 846 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 NBPF12Q5TAG4 269 aaPredicted RBP23.46■■□□□ 1.35
E4F1-203ENST00000563643 BRI3BPQ8WY22 251 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 ARHGAP39Q9C0H5 1083 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 ELP3Q9H9T3 547 aa23.46■■□□□ 1.35
E4F1-203ENST00000563643 MYBBP1AQ9BQG0 1328 aaKnown RBP23.45■■□□□ 1.34
E4F1-203ENST00000563643 ZBTB7BO15156 539 aaPredicted RBP23.45■■□□□ 1.34
E4F1-203ENST00000563643 HDGFL1Q5TGJ6 251 aa23.45■■□□□ 1.34
E4F1-203ENST00000563643 NKX2-3Q8TAU0 364 aa23.45■■□□□ 1.34
E4F1-203ENST00000563643 CCT4P50991 539 aaKnown RBP23.44■■□□□ 1.34
E4F1-203ENST00000563643 TXNRD3Q86VQ6 643 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms