RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PSMD14O00487 310 aa10.68□□□□□ -0.7
UBR1-204ENST00000563239 TAF1DQ9H5J8 278 aaPredicted RBP10.68□□□□□ -0.7
UBR1-204ENST00000563239 C1orf115Q9H7X2 142 aa10.68□□□□□ -0.7
UBR1-204ENST00000563239 COPRSQ9NQ92 184 aa10.68□□□□□ -0.7
UBR1-204ENST00000563239 ZNF646O15015 1829 aaPredicted RBP10.68□□□□□ -0.7
UBR1-204ENST00000563239 SHTN1A0MZ66 631 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 SRGAP3O43295 1099 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 TOMM70O94826 608 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
UBR1-204ENST00000563239 POTEIP0CG38 1075 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 EPS15P42566 896 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
UBR1-204ENST00000563239 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 POLA2Q14181 598 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
UBR1-204ENST00000563239 TNIP1Q15025 636 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 PODNQ7Z5L7 613 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 ZBTB12Q9Y330 459 aaPredicted RBP10.67□□□□□ -0.7
UBR1-204ENST00000563239 SCN4AP35499 1836 aa10.67□□□□□ -0.7
UBR1-204ENST00000563239 CIAO1O76071 339 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 PDE8BO95263 885 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 MS4A1P11836 297 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 FGFR2P21802 821 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 KCNJ4P48050 445 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 PDE3AQ14432 1141 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 METTL24Q5JXM2 366 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 COL13A1Q5TAT6 717 aaPredicted RBP10.66□□□□□ -0.7
UBR1-204ENST00000563239 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
UBR1-204ENST00000563239 GMLQ99445 158 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 COA1Q9GZY4 146 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 SIL1Q9H173 461 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 CD209Q9NNX6 404 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 GPRC5DQ9NZD1 345 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 HACL1Q9UJ83 578 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 FBXO3Q9UK99 471 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
UBR1-204ENST00000563239 ADAMTSL1Q8N6G6 1762 aa10.66□□□□□ -0.7
UBR1-204ENST00000563239 PSME4Q14997 1843 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 IL1R1P14778 569 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 EPHX2P34913 555 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 DACT2Q5SW24 774 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 FBXO33Q7Z6M2 555 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 SSH3Q8TE77 659 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 DPF2Q92785 391 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 FAM84BQ96KN1 310 aaPredicted RBP10.65□□□□□ -0.7
UBR1-204ENST00000563239 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 ZBTB40Q9NUA8 1239 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 ZNF609O15014 1411 aa10.65□□□□□ -0.7
UBR1-204ENST00000563239 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 G3V3G9 751 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
UBR1-204ENST00000563239 GYG1P46976 350 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
UBR1-204ENST00000563239 DCAF8Q5TAQ9 597 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 CEP85Q6P2H3 762 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 RSBN1LQ6PCB5 846 aaPredicted RBP10.64□□□□□ -0.71
UBR1-204ENST00000563239 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
UBR1-204ENST00000563239 EGFRP00533 1210 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 RPS12P25398 132 aaKnown RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 RRP1P56182 461 aaKnown RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 PUM3Q15397 648 aaKnown RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 STRIP1Q5VSL9 837 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 SIRT2Q8IXJ6 389 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 MICALL2Q8IY33 904 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 TNS4Q8IZW8 715 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 CERS5Q8N5B7 392 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 TDRD7Q8NHU6 1098 aaKnown RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 CNOT7Q9UIV1 285 aaKnown RBP10.63□□□□□ -0.71
UBR1-204ENST00000563239 DDX19BQ9UMR2 479 aa10.63□□□□□ -0.71
UBR1-204ENST00000563239 SASH1O94885 1247 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 HIBADHP31937 336 aaKnown RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 BCAMP50895 628 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 ZNF280AP59817 542 aaPredicted RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 GTF2IP78347 998 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 TFCP2Q12800 502 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 FSTL1Q12841 308 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 TTLL5Q6EMB2 1281 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 CHADLQ6NUI6 762 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 ZNF804AQ7Z570 1209 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 LDHDQ86WU2 507 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 SMC1BQ8NDV3 1235 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 AGBL3Q8NEM8 1001 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 TRPM4Q8TD43 1214 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 LPIN2Q92539 896 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 ADARB2Q9NS39 739 aaKnown RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
UBR1-204ENST00000563239 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
UBR1-204ENST00000563239 FAM205AQ6ZU69 1335 aa10.61□□□□□ -0.71
UBR1-204ENST00000563239 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
UBR1-204ENST00000563239 ATP2B3Q16720 1220 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms