RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
CMTM3-205ENST00000562707 COA1Q9GZY4 146 aa21.26■□□□□ 0.99
CMTM3-205ENST00000562707 NEURL1BA8MQ27 555 aa21.25■□□□□ 0.99
CMTM3-205ENST00000562707 STRIP1Q5VSL9 837 aa21.25■□□□□ 0.99
CMTM3-205ENST00000562707 LEMD3Q9Y2U8 911 aa21.25■□□□□ 0.99
CMTM3-205ENST00000562707 MYO3BQ8WXR4 1341 aa21.25■□□□□ 0.99
CMTM3-205ENST00000562707 H7C1W4 665 aa21.24■□□□□ 0.99
CMTM3-205ENST00000562707 SLC4A2P04920 1241 aa21.24■□□□□ 0.99
CMTM3-205ENST00000562707 TWISTNBQ3B726 338 aaPredicted RBP21.24■□□□□ 0.99
CMTM3-205ENST00000562707 NBPF9Q3BBW0 867 aa21.24■□□□□ 0.99
CMTM3-205ENST00000562707 DACT2Q5SW24 774 aa21.24■□□□□ 0.99
CMTM3-205ENST00000562707 UBE3BQ7Z3V4 1068 aa21.24■□□□□ 0.99
CMTM3-205ENST00000562707 UBE2Q2LH0YL09 131 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 NF2P35240 595 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 MMP14P50281 582 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 TTLL12Q14166 644 aaPredicted RBP21.23■□□□□ 0.99
CMTM3-205ENST00000562707 MXD3Q9BW11 206 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 ANKRD2Q9GZV1 360 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 SCAF8Q9UPN6 1271 aaKnown RBP21.23■□□□□ 0.99
CMTM3-205ENST00000562707 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
CMTM3-205ENST00000562707 CCDC27Q2M243 656 aa21.22■□□□□ 0.99
CMTM3-205ENST00000562707 PRAMEF18Q5VWM3 479 aa21.22■□□□□ 0.99
CMTM3-205ENST00000562707 MOB2Q70IA6 237 aa21.22■□□□□ 0.99
CMTM3-205ENST00000562707 G2E3Q7L622 706 aa21.22■□□□□ 0.99
CMTM3-205ENST00000562707 WNT10BO00744 389 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 TTLL5Q6EMB2 1281 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 CTU1Q7Z7A3 348 aaKnown RBP21.21■□□□□ 0.99
CMTM3-205ENST00000562707 WWC1Q8IX03 1113 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 MPHOSPH8Q99549 860 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 MYH16Q9H6N6 1097 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 ZNF804BA4D1E1 1349 aa21.21■□□□□ 0.99
CMTM3-205ENST00000562707 SLC34A2O95436 690 aa21.2■□□□□ 0.98
CMTM3-205ENST00000562707 ITGA6P23229 1130 aa21.2■□□□□ 0.98
CMTM3-205ENST00000562707 GCKRQ14397 625 aa21.2■□□□□ 0.98
CMTM3-205ENST00000562707 PLA2G12BQ9BX93 195 aa21.2■□□□□ 0.98
CMTM3-205ENST00000562707 HDAC9Q9UKV0 1011 aa21.2■□□□□ 0.98
CMTM3-205ENST00000562707 KCNJ4P48050 445 aa21.19■□□□□ 0.98
CMTM3-205ENST00000562707 TXNRD3Q86VQ6 643 aa21.19■□□□□ 0.98
CMTM3-205ENST00000562707 FLIIQ13045 1269 aa21.18■□□□□ 0.98
CMTM3-205ENST00000562707 POLR2AP24928 1970 aaKnown RBP21.17■□□□□ 0.98
CMTM3-205ENST00000562707 SASH1O94885 1247 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 CSF1RP07333 972 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 SOX10P56693 466 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 GTF2IP78347 998 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 FKBP5Q13451 457 aaPredicted RBP21.17■□□□□ 0.98
CMTM3-205ENST00000562707 ARMC9Q7Z3E5 817 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 APOBEC3FQ8IUX4 373 aaKnown RBP21.17■□□□□ 0.98
CMTM3-205ENST00000562707 KIAA0825Q8IV33 1275 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 DNAAF4Q8WXU2 420 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 IL16Q14005 1332 aa21.17■□□□□ 0.98
CMTM3-205ENST00000562707 PAPPA2Q9BXP8 1791 aa21.16■□□□□ 0.98
CMTM3-205ENST00000562707 TBC1D8O95759 1140 aa21.16■□□□□ 0.98
CMTM3-205ENST00000562707 TM4SF4P48230 202 aa21.16■□□□□ 0.98
CMTM3-205ENST00000562707 LINS1Q8NG48 757 aa21.16■□□□□ 0.98
CMTM3-205ENST00000562707 ANKRD18BA2A2Z9 1011 aa21.15■□□□□ 0.98
CMTM3-205ENST00000562707 CASP7P55210 303 aa21.15■□□□□ 0.98
CMTM3-205ENST00000562707 CHRNDQ07001 517 aa21.15■□□□□ 0.98
CMTM3-205ENST00000562707 PKN2Q16513 984 aaKnown RBP21.15■□□□□ 0.98
CMTM3-205ENST00000562707 KLRK1P26718 216 aa21.14■□□□□ 0.97
CMTM3-205ENST00000562707 SREBF2Q12772 1141 aa21.14■□□□□ 0.97
CMTM3-205ENST00000562707 PRKG1Q13976 671 aa21.14■□□□□ 0.97
CMTM3-205ENST00000562707 CCDC184Q52MB2 194 aa21.14■□□□□ 0.97
CMTM3-205ENST00000562707 CD209Q9NNX6 404 aa21.14■□□□□ 0.97
CMTM3-205ENST00000562707 PTPN12Q05209 780 aaKnown RBP21.13■□□□□ 0.97
CMTM3-205ENST00000562707 MKRN3Q13064 507 aaKnown RBP21.13■□□□□ 0.97
CMTM3-205ENST00000562707 DLGAP5Q15398 846 aa21.13■□□□□ 0.97
CMTM3-205ENST00000562707 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
CMTM3-205ENST00000562707 ZNF296Q8WUU4 475 aaPredicted RBP21.13■□□□□ 0.97
CMTM3-205ENST00000562707 HPS5Q9UPZ3 1129 aa21.12■□□□□ 0.97
CMTM3-205ENST00000562707 GPR25O00155 361 aa21.11■□□□□ 0.97
CMTM3-205ENST00000562707 IFIT5Q13325 482 aaKnown RBP21.11■□□□□ 0.97
CMTM3-205ENST00000562707 ZBED3Q96IU2 234 aaPredicted RBP21.11■□□□□ 0.97
CMTM3-205ENST00000562707 ANGEL1Q9UNK9 670 aaKnown RBP21.11■□□□□ 0.97
CMTM3-205ENST00000562707 CHMP3Q9Y3E7 222 aa21.11■□□□□ 0.97
CMTM3-205ENST00000562707 NOM1Q5C9Z4 860 aaKnown RBP21.1■□□□□ 0.97
CMTM3-205ENST00000562707 LDLRAD1Q5T700 205 aa21.1■□□□□ 0.97
CMTM3-205ENST00000562707 DEFB129Q9H1M3 183 aa21.1■□□□□ 0.97
CMTM3-205ENST00000562707 PSME4Q14997 1843 aa21.1■□□□□ 0.97
CMTM3-205ENST00000562707 FANCIQ9NVI1 1328 aa21.09■□□□□ 0.97
CMTM3-205ENST00000562707 VAMP4O75379 141 aa21.09■□□□□ 0.97
CMTM3-205ENST00000562707 TAF5LO75529 589 aa21.09■□□□□ 0.97
CMTM3-205ENST00000562707 C15orf52Q6ZUT6 534 aaKnown RBP21.09■□□□□ 0.97
CMTM3-205ENST00000562707 ZNF804AQ7Z570 1209 aa21.09■□□□□ 0.97
CMTM3-205ENST00000562707 HELBQ8NG08 1087 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-205ENST00000562707 SNAP23O00161 211 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 MYO1BO43795 1136 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 SPRYD7Q5W111 196 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 WDR63Q8IWG1 891 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 MTMR14Q8NCE2 650 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 SLC10A4Q96EP9 437 aa21.08■□□□□ 0.97
CMTM3-205ENST00000562707 SALL2Q9Y467 1007 aaPredicted RBP21.08■□□□□ 0.97
CMTM3-205ENST00000562707 PPP1R12BO60237 982 aaPredicted RBP21.07■□□□□ 0.96
CMTM3-205ENST00000562707 FKTNO75072 461 aa21.07■□□□□ 0.96
CMTM3-205ENST00000562707 ALDH1A1P00352 501 aa21.07■□□□□ 0.96
CMTM3-205ENST00000562707 INHBEP58166 350 aa21.07■□□□□ 0.96
CMTM3-205ENST00000562707 FOXO4P98177 505 aa21.07■□□□□ 0.96
CMTM3-205ENST00000562707 EXOSC9Q06265 439 aaKnown RBP21.07■□□□□ 0.96
CMTM3-205ENST00000562707 CERS5Q8N5B7 392 aa21.07■□□□□ 0.96
CMTM3-205ENST00000562707 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms