RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01963-201ENST00000562038 USP44Q9H0E7 712 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 ZBTB3Q9H5J0 574 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.04□□□□□ -1.28
LINC01963-201ENST00000562038 RFX7Q2KHR2 1363 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 PPEF1O14829 653 aaPredicted RBP7.04□□□□□ -1.28
LINC01963-201ENST00000562038 RGS20O76081 388 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 DPEP1P16444 411 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 HSP90AB4PQ58FF6 505 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 SSH3Q8TE77 659 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 EYA3Q99504 573 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 STXBP5LQ9Y2K9 1186 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 XDHP47989 1333 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 MYO3BQ8WXR4 1341 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 SALL1Q9NSC2 1324 aa7.04□□□□□ -1.28
LINC01963-201ENST00000562038 ZBTB7BO15156 539 aaPredicted RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 RRP1P56182 461 aaKnown RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 FMR1Q06787 632 aaKnown RBP eCLIP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 CNGB1Q14028 1251 aaPredicted RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 DDX46Q7L014 1031 aaKnown RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 RPGRQ92834 1020 aaKnown RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 MRIQ9BWK5 157 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 KCNQ4P56696 695 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 ERC1Q8IUD2 1116 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 SNX27Q96L92 541 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 GNAI2P04899 355 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 RPS12P25398 132 aaKnown RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 UBE4AQ14139 1066 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 CTU1Q7Z7A3 348 aaKnown RBP7.03□□□□□ -1.28
LINC01963-201ENST00000562038 RGS22Q8NE09 1264 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 KAZALD1Q96I82 304 aa7.03□□□□□ -1.28
LINC01963-201ENST00000562038 ANKRD18BA2A2Z9 1011 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 PRPF40BQ6NWY9 871 aaKnown RBP7.02□□□□□ -1.29
LINC01963-201ENST00000562038 PRDM16Q9HAZ2 1276 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 ZBTB40Q9NUA8 1239 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 PGAP2Q9UHJ9 254 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 ZNF804BA4D1E1 1349 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 AOX1Q06278 1338 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 ATP8B2P98198 1209 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 HDAC1Q13547 482 aaPredicted RBP7.02□□□□□ -1.29
LINC01963-201ENST00000562038 DGKZQ13574 1117 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 VGLL2Q8N8G2 317 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 SLC17A8Q8NDX2 589 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 RNF181Q9P0P0 153 aa7.02□□□□□ -1.29
LINC01963-201ENST00000562038 CASP8AP2Q9UKL3 1982 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 UBTFL1P0CB47 393 aaPredicted RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 IL15P40933 162 aaPredicted RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 FAM205AQ6ZU69 1335 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 RPAP1Q9BWH6 1393 aaPredicted RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 FZD9O00144 591 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 RAD21O60216 631 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 RBM25P49756 843 aaKnown RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 RPS8P62241 208 aaKnown RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 PNMA8AQ86V59 439 aaPredicted RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 ANKRD18AQ8IVF6 992 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 HMMRO75330 724 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 FGFR2P21802 821 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 IGHMBP2P38935 993 aaKnown RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 MTMR14Q8NCE2 650 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 TMX4Q9H1E5 349 aaPredicted RBP7.01□□□□□ -1.29
LINC01963-201ENST00000562038 RIPOR2Q9Y4F9 1068 aa7.01□□□□□ -1.29
LINC01963-201ENST00000562038 UNCXA6NJT0 531 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 MSH5O43196 834 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 IL1R1P14778 569 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 HDLBPQ00341 1268 aaKnown RBP7□□□□□ -1.29
LINC01963-201ENST00000562038 FAM109BQ6ICB4 259 aaPredicted RBP7□□□□□ -1.29
LINC01963-201ENST00000562038 FAM177A1Q8N128 213 aaPredicted RBP7□□□□□ -1.29
LINC01963-201ENST00000562038 SUCLG2Q96I99 432 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 COL4A5P29400 1685 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 IFIT5Q13325 482 aaKnown RBP7□□□□□ -1.29
LINC01963-201ENST00000562038 ARHGAP27Q6ZUM4 889 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 KCTD17Q8N5Z5 321 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 COA1Q9GZY4 146 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 TAOK3Q9H2K8 898 aa7□□□□□ -1.29
LINC01963-201ENST00000562038 C9orf78Q9NZ63 289 aaPredicted RBP7□□□□□ -1.29
LINC01963-201ENST00000562038 NT5C2P49902 561 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 PPP4R3CPQ6ZMV5 832 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 CNPY4Q8N129 248 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 AKAP2Q9Y2D5 859 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 LAMA4Q16363 1823 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 EYA2O00167 538 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 AIMP1Q12904 312 aaKnown RBP6.99□□□□□ -1.29
LINC01963-201ENST00000562038 MSL1Q68DK7 614 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 FTSJ3Q8IY81 847 aaKnown RBP6.99□□□□□ -1.29
LINC01963-201ENST00000562038 TMEM57Q8N5G2 664 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 DPF2Q92785 391 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 CDK5RAP2Q96SN8 1893 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 SCN9AQ15858 1988 aa6.99□□□□□ -1.29
LINC01963-201ENST00000562038 NFKBIEO00221 500 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 ANXA1P04083 346 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 IARSP41252 1262 aaKnown RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 CWF19L2Q2TBE0 894 aaKnown RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 UBE3BQ7Z3V4 1068 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 PODNQ7Z5L7 613 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 CAPNS2Q96L46 248 aa6.98□□□□□ -1.29
LINC01963-201ENST00000562038 TAF1DQ9H5J8 278 aaPredicted RBP6.98□□□□□ -1.29
LINC01963-201ENST00000562038 ITGA6P23229 1130 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms