RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	NXF1	Q9UBU9	619 aa	Known RBP	10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	IVNS1ABP	Q9Y6Y0	642 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	LRP6	O75581	1613 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	ZNF211	Q13398	564 aa	Predicted RBP	10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	LRRC69	Q6ZNQ3	347 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	KCTD17	Q8N5Z5	321 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	STK26	Q9P289	416 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	MTMR7	Q9Y216	660 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	BCS1L	Q9Y276	419 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	ADGRL3	Q9HAR2	1447 aa		10.41	□□□□□ -0.74
MARK3-223	ENST00000561071	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	SPATA31A6	Q5VVP1	1343 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	ASXL1	Q8IXJ9	1541 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	TNFRSF10B	O14763	440 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	FAM26D	Q5JW98	314 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	TMEM132E	Q6IEE7	984 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	CCER1	Q8TC90	406 aa	Predicted RBP	10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	ZNF837	Q96EG3	531 aa	Predicted RBP	10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	SUSD3	Q96L08	255 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	ORAI2	Q96SN7	254 aa		10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	NUCKS1	Q9H1E3	243 aa	Known RBP	10.4	□□□□□ -0.74
MARK3-223	ENST00000561071	DCC	P43146	1447 aa		10.4	□□□□□ -0.75
MARK3-223	ENST00000561071	CDC14C	A4D256	554 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	C11orf91	Q3C1V1	193 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	EFHC2	Q5JST6	749 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	TRIM22	Q8IYM9	498 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	HELQ	Q8TDG4	1101 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	GNE	Q9Y223	722 aa	Known RBP	10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	CCDC144A	A2RUR9	1427 aa		10.39	□□□□□ -0.75
MARK3-223	ENST00000561071	NALCN	Q8IZF0	1738 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071		H7C1W4	665 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	WAPL	Q7Z5K2	1190 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	NEUROD4	Q9HD90	331 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	GPC6	Q9Y625	555 aa	Predicted RBP	10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	GJA3	Q9Y6H8	435 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	SPATA31E1	Q6ZUB1	1445 aa		10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	SETD1A	O15047	1707 aa	Known RBP	10.38	□□□□□ -0.75
MARK3-223	ENST00000561071	C1orf167	Q5SNV9	1468 aa		10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	PPL	O60437	1756 aa		10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	UBAP2L	Q14157	1087 aa	Known RBP	10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	VWA5B2	Q8N398	1253 aa		10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	LRRC59	Q96AG4	307 aa	Known RBP	10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	SETD5	Q9C0A6	1442 aa		10.37	□□□□□ -0.75
MARK3-223	ENST00000561071	PTCH1	Q13635	1447 aa		10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	NLRP8	Q86W28	1048 aa		10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	ETFBKMT	Q8IXQ9	262 aa		10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	GTPBP3	Q969Y2	492 aa	Known RBP	10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	IFT43	Q96FT9	208 aa		10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.36	□□□□□ -0.75
MARK3-223	ENST00000561071	SHPRH	Q149N8	1683 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071		H3BRB1	525 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	GPR25	O00155	361 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	BRD2	P25440	801 aa	Known RBP	10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	LBR	Q14739	615 aa	Known RBP	10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	ZNF772	Q68DY9	489 aa	Predicted RBP	10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	C8orf37	Q96NL8	207 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	TUT1	Q9H6E5	874 aa	Known RBP	10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	STIM2	Q9P246	746 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	ANKIB1	Q9P2G1	1089 aa		10.35	□□□□□ -0.75
MARK3-223	ENST00000561071	AFF2	P51816	1311 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	NHSL1	Q5SYE7	1610 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071		H3BM21	787 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	TGFBR3L	H3BV60	316 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	TERT	O14746	1132 aa	Known RBP	10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	ZBTB39	O15060	712 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	ICMT	O60725	284 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	ADAMTS2	O95450	1211 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	MPST	P25325	297 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	XPC	Q01831	940 aa	Predicted RBP	10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	HIF1A	Q16665	826 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	EGFL7	Q9UHF1	273 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	DMGDH	Q9UI17	866 aa	Known RBP	10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	PNPLA6	Q8IY17	1366 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	ANKRD30B	Q9BXX2	1392 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	RAB3GAP2	Q9H2M9	1393 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	PLEKHH1	Q9ULM0	1364 aa		10.34	□□□□□ -0.75
MARK3-223	ENST00000561071	PATL2	C9JE40	543 aa	Known RBP	10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	SV2A	Q7L0J3	742 aa		10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	BTLA	Q7Z6A9	289 aa		10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	TREML1	Q86YW5	311 aa		10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	NANOS1	Q8WY41	292 aa	Known RBP	10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	GMCL1	Q96IK5	515 aa		10.33	□□□□□ -0.76
MARK3-223	ENST00000561071	LRPPRC	P42704	1394 aa	Known RBP	10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	DCDC2B	A2VCK2	349 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	SOWAHD	A6NJG2	315 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	ATXN7	O15265	892 aa	Predicted RBP	10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	BNIP3L	O60238	219 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	RXRB	P28702	533 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	TRIM26	Q12899	539 aa	Predicted RBP	10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	SF3B2	Q13435	895 aa	Known RBP	10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	NPAS3	Q8IXF0	933 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	PRAG1	Q86YV5	1406 aa		10.32	□□□□□ -0.76
MARK3-223	ENST00000561071	ABCC11	Q96J66	1382 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	MICAL2	O94851	1124 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	IDH3A	P50213	366 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	TYRO3	Q06418	890 aa		10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	SAFB2	Q14151	953 aa	Known RBP eCLIP	10.31	□□□□□ -0.76
MARK3-223	ENST00000561071	ECM1	Q16610	540 aa		10.31	□□□□□ -0.76

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