RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 PDE1AP54750 535 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 C15orf52Q6ZUT6 534 aaKnown RBP16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 GGA1Q9UJY5 639 aa16.73■□□□□ 0.27
HMBOX1-213ENST00000560269 ADORA1P30542 326 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 RGS3P49796 1198 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 CCDC93Q567U6 631 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 DPP8Q6V1X1 898 aaPredicted RBP16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 POLLQ9UGP5 575 aa16.72■□□□□ 0.27
HMBOX1-213ENST00000560269 UFL1O94874 794 aa16.71■□□□□ 0.27
HMBOX1-213ENST00000560269 RTKN2Q8IZC4 609 aa16.71■□□□□ 0.27
HMBOX1-213ENST00000560269 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
HMBOX1-213ENST00000560269 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
HMBOX1-213ENST00000560269 FER1L6Q2WGJ9 1857 aa16.7■□□□□ 0.26
HMBOX1-213ENST00000560269 GORABQ5T7V8 394 aa16.7■□□□□ 0.26
HMBOX1-213ENST00000560269 PI4K2BQ8TCG2 481 aa16.7■□□□□ 0.26
HMBOX1-213ENST00000560269 ZNF512BQ96KM6 892 aaPredicted RBP16.7■□□□□ 0.26
HMBOX1-213ENST00000560269 C6orf229H3BNL8 230 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 ERC2O15083 957 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 ZBTB22O15209 634 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 ATP5JP18859 108 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 KLRK1P26718 216 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 CCDC102BQ68D86 513 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 FBXO33Q7Z6M2 555 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 TXNRD3Q86VQ6 643 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 FAM84BQ96KN1 310 aaPredicted RBP16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 PSMD1Q99460 953 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
HMBOX1-213ENST00000560269 GOLGB1Q14789 3259 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 GLRX3O76003 335 aaKnown RBP16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 ARID4AP29374 1257 aaPredicted RBP16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 CAVIN4Q5BKX8 364 aa16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 TTC22Q5TAA0 569 aa16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 TSHZ3Q63HK5 1081 aa16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 SUPT20HQ8NEM7 779 aa16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 SRCAPQ6ZRS2 3230 aa16.68■□□□□ 0.26
HMBOX1-213ENST00000560269 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 UQCRFS1P1P0C7P4 283 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 PHKA1P46020 1223 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 GYG1P46976 350 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 BCAMP50895 628 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 TTC39AQ5SRH9 613 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 EYA3Q99504 573 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 WWC3Q9ULE0 1092 aa16.67■□□□□ 0.26
HMBOX1-213ENST00000560269 HIBADHP31937 336 aaKnown RBP16.66■□□□□ 0.26
HMBOX1-213ENST00000560269 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
HMBOX1-213ENST00000560269 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
HMBOX1-213ENST00000560269 VPS33BQ9H267 617 aa16.66■□□□□ 0.26
HMBOX1-213ENST00000560269 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 GSPT1P15170 499 aaKnown RBP16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 GNL3LQ9NVN8 582 aaKnown RBP16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 LTBP3Q9NS15 1303 aa16.65■□□□□ 0.26
HMBOX1-213ENST00000560269 SEMA3EO15041 775 aa16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 VPS37DQ86XT2 251 aa16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 TDRD7Q8NHU6 1098 aaKnown RBP16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 HAUS7Q99871 368 aa16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
HMBOX1-213ENST00000560269 NFKBIEO00221 500 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 IL1R1P14778 569 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 MCAMP43121 646 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 SCARF1Q14162 830 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 COA1Q9GZY4 146 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 CD209Q9NNX6 404 aa16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
HMBOX1-213ENST00000560269 RASGRF1Q13972 1273 aa16.62■□□□□ 0.25
HMBOX1-213ENST00000560269 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
HMBOX1-213ENST00000560269 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
HMBOX1-213ENST00000560269 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
HMBOX1-213ENST00000560269 AK9Q5TCS8 1911 aa16.62■□□□□ 0.25
HMBOX1-213ENST00000560269 COL1A1P02452 1464 aaPredicted RBP16.61■□□□□ 0.25
HMBOX1-213ENST00000560269 AOC3Q16853 763 aa16.61■□□□□ 0.25
HMBOX1-213ENST00000560269 SPATA5Q8NB90 893 aa16.61■□□□□ 0.25
HMBOX1-213ENST00000560269 CHD4Q14839 1912 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 YBX3P16989 372 aaKnown RBP eCLIP16.6■□□□□ 0.253e-9■■■□□ 15.5
HMBOX1-213ENST00000560269 SDSP20132 328 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 ZAP70P43403 619 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 SNRKQ9NRH2 765 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 ZNF277Q9NRM2 450 aaPredicted RBP16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 PAG1Q9NWQ8 432 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 IQSEC3Q9UPP2 1182 aaPredicted RBP16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
HMBOX1-213ENST00000560269 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
HMBOX1-213ENST00000560269 MAP4K4O95819 1239 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 297.2 ms