RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 BCORQ6W2J9 1755 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 GOLIM4O00461 696 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 CSF1RP07333 972 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 DZIP3Q86Y13 1208 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 SEC62Q99442 399 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 TPCN1Q9ULQ1 816 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 TAF6LQ9Y6J9 622 aa17.26■□□□□ 0.35
RABGGTA-212ENST00000559974 MYH7P12883 1935 aa17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 CHGBP05060 677 aa17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 GJB2P29033 226 aa17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 TFCP2L1Q9NZI6 479 aa17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-212ENST00000559974 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 CAMTA2O94983 1202 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 TMEM63CQ9P1W3 806 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
RABGGTA-212ENST00000559974 PNPLA7Q6ZV29 1317 aa17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 F13A1P00488 732 aa17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 COL23A1Q86Y22 540 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 TMEM87AQ8NBN3 555 aa17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
RABGGTA-212ENST00000559974 TOB2Q14106 344 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 SLC15A2Q16348 729 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 TCEANC2Q96MN5 208 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 ATP6V1DQ9Y5K8 247 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 GPTP24298 496 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 ZMYM1Q5SVZ6 1142 aa17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-212ENST00000559974 GOLGB1Q14789 3259 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 CYP21A2P08686 494 aa17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 NASPP49321 788 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 CCDC158Q5M9N0 1113 aa17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 NEK1Q96PY6 1258 aa17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
RABGGTA-212ENST00000559974 TRAPPC3LQ5T215 181 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 GDPD2Q9HCC8 539 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 PDIA4P13667 645 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 SYNE4Q8N205 404 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
RABGGTA-212ENST00000559974 ADORA1P30542 326 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 CTSWP56202 376 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 SYAP1Q96A49 352 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 ABCC12Q96J65 1359 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 GADD45BO75293 160 aaPredicted RBP17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 RFC4P35249 363 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 LRRFIP1Q32MZ4 808 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 SLFNL1Q499Z3 407 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 LRSAM1Q6UWE0 723 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
RABGGTA-212ENST00000559974 MAST3O60307 1309 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 UBN2Q6ZU65 1347 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 QSER1Q2KHR3 1735 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 SYCE3A1L190 88 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 IRS4O14654 1257 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 ITGA6P23229 1130 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 MSL1Q68DK7 614 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 GREM2Q9H772 168 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
RABGGTA-212ENST00000559974 ANKRD18BA2A2Z9 1011 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 PSDA5PKW4 1024 aaPredicted RBP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 PDCP20941 246 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 VPS37CA5D8V6 355 aaPredicted RBP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 FAM177BA6PVY3 158 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 DTNBO60941 627 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 HMGB1P09429 215 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 HSPD1P10809 573 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 GYS1P13807 737 aa17.17■□□□□ 0.34
RABGGTA-212ENST00000559974 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms