RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 KMT5BQ4FZB7 885 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 ESYT1Q9BSJ8 1104 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 BCAS4Q8TDM0 211 aa4.18□□□□□ -1.74
ATXN3-248ENST00000558190 EVI5LQ96CN4 794 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 IKBKGQ9Y6K9 419 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 F13A1P00488 732 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 SLFNL1Q499Z3 407 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 PPP1R42Q7Z4L9 355 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 FAM169AQ9Y6X4 670 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 C1orf141Q5JVX7 400 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 EFCAB8A8MWE9 144 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 STAMBPO95630 424 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 SLC8A1P32418 973 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 CA8P35219 290 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 CYP26C1Q6V0L0 522 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 FBLN1P23142 703 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TRAF1Q13077 416 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TTC39AQ5SRH9 613 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 CASQ2O14958 399 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 IARSP41252 1262 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 NLRP12P59046 1061 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 OTUD7AQ8TE49 926 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MACROD2A1Z1Q3 448 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 GMNCA6NCL1 334 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 AOPEPQ8N6M6 819 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MRPS9P82933 396 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 C8orf58Q8NAV2 365 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 LEO1Q8WVC0 666 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 GKAP1Q5VSY0 366 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MORC4Q8TE76 937 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 PLEKHO1Q53GL0 409 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TBC1D1Q86TI0 1168 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MRPL50Q8N5N7 158 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 SPTLC3Q9NUV7 552 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 RNF216Q9NWF9 866 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 DHX32Q7L7V1 743 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 DZIP1Q86YF9 867 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TSG101Q99816 390 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 GEMIN8Q9NWZ8 242 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 ZNF213O14771 459 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 IKQ13123 557 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TRIM58Q8NG06 486 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 SPAG5Q96R06 1193 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MINK1Q8N4C8 1332 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 VAMP4O75379 141 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 IRAK1P51617 712 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 APOBRQ0VD83 1088 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 BICD1Q96G01 975 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 TTC14Q96N46 770 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 A0A1B0GVL5 298 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 Q6ZUG5 572 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 CYP2C19P33261 490 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 ALDH1L2Q3SY69 923 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 HAUS1Q96CS2 278 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 MYCNP04198 464 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 PNMA6AP0CW24 399 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 LRRC45Q96CN5 670 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 THOC1Q96FV9 657 aaKnown RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 LRP2BPQ9P2M1 347 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 WWC3Q9ULE0 1092 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 ERCC5P28715 1186 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 CEP120Q8N960 986 aa4.17□□□□□ -1.74
ATXN3-248ENST00000558190 BRD4O60885 1362 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-248ENST00000558190 ATL3Q6DD88 541 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 FAF1Q9UNN5 650 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TBC1D5Q92609 795 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 MAP7D1Q3KQU3 841 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC170Q8IYT3 715 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NAP1L3Q99457 506 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ROCK2O75116 1388 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 MINDY4BA8MYZ0 360 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CYLC1P35663 651 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 FAM133BQ5BKY9 247 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC197Q8NCU1 140 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 TUBB6Q9BUF5 446 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ATG3Q9NT62 314 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ZNF365Q70YC5 407 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 PRPF38AQ8NAV1 312 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 STMN2Q93045 179 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CDK19Q9BWU1 502 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NLRP2Q9NX02 1062 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 KLHL14Q9P2G3 628 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 LONRF2Q1L5Z9 754 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 AKNAD1Q5T1N1 836 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 HHATQ5VTY9 493 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 DDX23Q9BUQ8 820 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 SPAG9O60271 1321 aaKnown RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 GOLGA8FQ08AF8 430 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 GOLGA8DPQ0D2H9 430 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 SLC24A3Q9HC58 644 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 ZPR1O75312 459 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 KRT9P35527 623 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 CLCN6P51797 869 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 SEPT6Q14141 434 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 PPP2R2CQ9Y2T4 447 aa4.16□□□□□ -1.74
ATXN3-248ENST00000558190 NBPF7P0C2Y1 421 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-248ENST00000558190 PEX19P40855 299 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms