RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 PODNQ7Z5L7 613 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 RBM46Q8TBY0 533 aaKnown RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 CHMP4BQ9H444 224 aaKnown RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 COG6Q9Y2V7 657 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
SPG11-207ENST00000558138 SCN4AP35499 1836 aa11.16□□□□□ -0.62
SPG11-207ENST00000558138 SLC5A1P13866 664 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 EPS15P42566 896 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 UBE4AQ14139 1066 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 MVPQ14764 893 aaKnown RBP11.15□□□□□ -0.62
SPG11-207ENST00000558138 PUM3Q15397 648 aaKnown RBP11.15□□□□□ -0.62
SPG11-207ENST00000558138 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 GPRC5DQ9NZD1 345 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 CEP126Q9P2H0 1117 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 CNOT7Q9UIV1 285 aaKnown RBP11.15□□□□□ -0.62
SPG11-207ENST00000558138 DDX19BQ9UMR2 479 aa11.15□□□□□ -0.62
SPG11-207ENST00000558138 PA2G4Q9UQ80 394 aaKnown RBP11.15□□□□□ -0.62
SPG11-207ENST00000558138 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 POTECB2RU33 542 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 PDE8BO95263 885 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
SPG11-207ENST00000558138 SCNN1DP51172 638 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
SPG11-207ENST00000558138 FSTL1Q12841 308 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 G3BP1Q13283 466 aaKnown RBP eCLIP11.14□□□□□ -0.63
SPG11-207ENST00000558138 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
SPG11-207ENST00000558138 CHADLQ6NUI6 762 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 TXNRD3Q86VQ6 643 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 KCNQ5Q9NR82 932 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
SPG11-207ENST00000558138 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
SPG11-207ENST00000558138 CIAO1O76071 339 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
SPG11-207ENST00000558138 IL15P40933 162 aaPredicted RBP11.13□□□□□ -0.63
SPG11-207ENST00000558138 GYG1P46976 350 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 RFX5P48382 616 aaPredicted RBP11.13□□□□□ -0.63
SPG11-207ENST00000558138 GTF2IP78347 998 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 TTLL5Q6EMB2 1281 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 RSBN1LQ6PCB5 846 aaPredicted RBP11.13□□□□□ -0.63
SPG11-207ENST00000558138 CD209Q9NNX6 404 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
SPG11-207ENST00000558138 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 ZBTB7BO15156 539 aaPredicted RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 VIL1P09327 827 aaKnown RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 CHAF1AQ13111 956 aaPredicted RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 TBC1D10BQ4KMP7 808 aaPredicted RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 OGFOD1Q8N543 542 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 BCL11AQ9H165 835 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 HDAC9Q9UKV0 1011 aa11.12□□□□□ -0.63
SPG11-207ENST00000558138 IQSEC3Q9UPP2 1182 aaPredicted RBP11.12□□□□□ -0.63
SPG11-207ENST00000558138 PNMA6EA0A0J9YXQ4 647 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 F8W031 263 aaPredicted RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 USP17L8P0C7I0 530 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 RRP1P56182 461 aaKnown RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 MTX1Q13505 466 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 KIF4BQ2VIQ3 1234 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 MAP1SQ66K74 1059 aaPredicted RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 C15orf52Q6ZUT6 534 aaKnown RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 AGBL3Q8NEM8 1001 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 LPIN2Q92539 896 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 DPF2Q92785 391 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 MXD3Q9BW11 206 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 GNL3LQ9NVN8 582 aaKnown RBP11.11□□□□□ -0.63
SPG11-207ENST00000558138 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
SPG11-207ENST00000558138 SCN9AQ15858 1988 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 HMMRO75330 724 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 HSPA6P17066 643 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 TFCP2Q12800 502 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 C20orf194Q5TEA3 1177 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 ATG9AQ7Z3C6 839 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 SAMD7Q7Z3H4 446 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 KIAA0825Q8IV33 1275 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
SPG11-207ENST00000558138 IL1R1P14778 569 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 BCAMP50895 628 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
SPG11-207ENST00000558138 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 CEP85Q6P2H3 762 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 CNTROBQ8N137 903 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 VGLL2Q8N8G2 317 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 DCPSQ96C86 337 aaKnown RBP11.09□□□□□ -0.63
SPG11-207ENST00000558138 MYOZ2Q9NPC6 264 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 PSME4Q14997 1843 aa11.09□□□□□ -0.63
SPG11-207ENST00000558138 APBB1O00213 710 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms