RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 RUSC1Q9BVN2 902 aa7.51□□□□□ -1.21
FOXN3-217ENST00000557572 SEC31BQ9NQW1 1179 aa7.51□□□□□ -1.21
FOXN3-217ENST00000557572 OPLAHO14841 1288 aa7.5□□□□□ -1.21
FOXN3-217ENST00000557572 ATP11AP98196 1134 aa7.5□□□□□ -1.21
FOXN3-217ENST00000557572 PLCL1Q15111 1095 aa7.5□□□□□ -1.21
FOXN3-217ENST00000557572 KRTAP9-3Q9BYQ3 159 aa7.5□□□□□ -1.21
FOXN3-217ENST00000557572 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 LGR5O75473 907 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 SMNDC1O75940 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
FOXN3-217ENST00000557572 ZNF792Q3KQV3 632 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 FAM168AQ92567 244 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 SPACA7Q96KW9 195 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 HINFPQ9BQA5 517 aa7.49□□□□□ -1.21
FOXN3-217ENST00000557572 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
FOXN3-217ENST00000557572 MKRN1Q9UHC7 482 aaKnown RBP7.49□□□□□ -1.21
FOXN3-217ENST00000557572 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
FOXN3-217ENST00000557572 EPHA1P21709 976 aa7.48□□□□□ -1.21
FOXN3-217ENST00000557572 PLEKHM2Q8IWE5 1019 aa7.48□□□□□ -1.21
FOXN3-217ENST00000557572 FAM177BA6PVY3 158 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 NLRP12P59046 1061 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 C11orf91Q3C1V1 193 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 PAOXQ6QHF9 649 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 ADAMTSL4Q6UY14 1074 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 TBC1D32Q96NH3 1257 aa7.47□□□□□ -1.21
FOXN3-217ENST00000557572 DKK1O94907 266 aa7.46□□□□□ -1.22
FOXN3-217ENST00000557572 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
FOXN3-217ENST00000557572 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
FOXN3-217ENST00000557572 KCNMB2Q9Y691 235 aa7.46□□□□□ -1.22
FOXN3-217ENST00000557572 SLC24A1O60721 1099 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 ADMP35318 185 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 COL13A1Q5TAT6 717 aaPredicted RBP7.45□□□□□ -1.22
FOXN3-217ENST00000557572 TOX2Q96NM4 488 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 RASSF4Q9H2L5 321 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 QTRT2Q9H974 415 aaKnown RBP7.45□□□□□ -1.22
FOXN3-217ENST00000557572 LRRC4CQ9HCJ2 640 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
FOXN3-217ENST00000557572 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
FOXN3-217ENST00000557572 FAM170BA6NMN3 283 aa7.44□□□□□ -1.22
FOXN3-217ENST00000557572 SEC13P55735 322 aa7.44□□□□□ -1.22
FOXN3-217ENST00000557572 HYAL2Q12891 473 aa7.44□□□□□ -1.22
FOXN3-217ENST00000557572 FAM84AQ96KN4 292 aa7.44□□□□□ -1.22
FOXN3-217ENST00000557572 CFPP27918 469 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 USP11P51784 963 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 ZNF574Q6ZN55 896 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-217ENST00000557572 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 ATG4DQ86TL0 474 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-217ENST00000557572 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 ZSCAN18Q8TBC5 510 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-217ENST00000557572 FBLIM1Q8WUP2 373 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
FOXN3-217ENST00000557572 IGFBP4P22692 258 aa7.42□□□□□ -1.22
FOXN3-217ENST00000557572 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
FOXN3-217ENST00000557572 NUTM2GQ5VZR2 741 aa7.42□□□□□ -1.22
FOXN3-217ENST00000557572 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
FOXN3-217ENST00000557572 TREML1Q86YW5 311 aa7.42□□□□□ -1.22
FOXN3-217ENST00000557572 MEGF11A6BM72 1044 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 PTPRAP18433 802 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 RAP1GAPP47736 663 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 CABP4P57796 275 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 PIP4K2BP78356 416 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 DUSP27Q5VZP5 1158 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
FOXN3-217ENST00000557572 SLC7A3Q8WY07 619 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 ZMYND15Q9H091 742 aa7.41□□□□□ -1.22
FOXN3-217ENST00000557572 H3BRJ5 948 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 SCNN1AP37088 669 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 CILP2Q8IUL8 1156 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 OR13H1Q8NG92 308 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 ADAM19Q9H013 955 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
FOXN3-217ENST00000557572 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 PRKAG2Q9UGJ0 569 aa7.4□□□□□ -1.22
FOXN3-217ENST00000557572 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 SPRED2Q7Z698 418 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 GLIS3Q8NEA6 775 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 BHLHE22Q8NFJ8 381 aaPredicted RBP7.39□□□□□ -1.23
FOXN3-217ENST00000557572 WNT8BQ93098 351 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 VTI1AQ96AJ9 217 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
FOXN3-217ENST00000557572 LRRC10BA6NIK2 292 aa7.38□□□□□ -1.23
FOXN3-217ENST00000557572 ECM1Q16610 540 aa7.38□□□□□ -1.23
FOXN3-217ENST00000557572 LRRC56Q8IYG6 542 aaPredicted RBP7.38□□□□□ -1.23
FOXN3-217ENST00000557572 POP1Q99575 1024 aaKnown RBP7.38□□□□□ -1.23
FOXN3-217ENST00000557572 CYP4F12Q9HCS2 524 aa7.38□□□□□ -1.23
FOXN3-217ENST00000557572 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
FOXN3-217ENST00000557572 ATP9BO43861 1147 aa7.37□□□□□ -1.23
FOXN3-217ENST00000557572 ZSCAN22P10073 491 aaPredicted RBP7.37□□□□□ -1.23
FOXN3-217ENST00000557572 C1QL4Q86Z23 238 aa7.37□□□□□ -1.23
FOXN3-217ENST00000557572 SIAH1Q8IUQ4 282 aa7.37□□□□□ -1.23
FOXN3-217ENST00000557572 BCANQ96GW7 911 aa7.37□□□□□ -1.23
FOXN3-217ENST00000557572 MYO19Q96H55 970 aa7.37□□□□□ -1.23
FOXN3-217ENST00000557572 DRD2P14416 443 aa7.36□□□□□ -1.23
FOXN3-217ENST00000557572 BNIP3Q12983 259 aa7.36□□□□□ -1.23
FOXN3-217ENST00000557572 TTLL10Q6ZVT0 673 aa7.36□□□□□ -1.23
FOXN3-217ENST00000557572 STK11IPQ8N1F8 1099 aa7.36□□□□□ -1.23
FOXN3-217ENST00000557572 SMG8Q8ND04 991 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms