RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 MAPK8IP3Q9UPT6 1336 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 RNF40O75150 1001 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 NTSR2O95665 410 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 LMOD1P29536 600 aaPredicted RBP11.39□□□□□ -0.59
VRK1-206ENST00000557222 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
VRK1-206ENST00000557222 VEGFBP49765 207 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 HIC1Q14526 733 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 TMX4Q9H1E5 349 aaPredicted RBP11.39□□□□□ -0.59
VRK1-206ENST00000557222 DLG5Q8TDM6 1919 aa11.39□□□□□ -0.59
VRK1-206ENST00000557222 FOXN1O15353 648 aa11.38□□□□□ -0.59
VRK1-206ENST00000557222 MYL6BP14649 208 aa11.38□□□□□ -0.59
VRK1-206ENST00000557222 DEFB115Q30KQ5 88 aa11.38□□□□□ -0.59
VRK1-206ENST00000557222 USP50Q70EL3 339 aaPredicted RBP11.38□□□□□ -0.59
VRK1-206ENST00000557222 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
VRK1-206ENST00000557222 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
VRK1-206ENST00000557222 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
VRK1-206ENST00000557222 GPR37O15354 613 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 BBOX1O75936 387 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 GPTP24298 496 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 MAP2K1Q02750 393 aaPredicted RBP11.37□□□□□ -0.59
VRK1-206ENST00000557222 LMOD3Q0VAK6 560 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
VRK1-206ENST00000557222 RTFDC1Q9BY42 306 aaPredicted RBP11.37□□□□□ -0.59
VRK1-206ENST00000557222 ZBTB3Q9H5J0 574 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 DDX21Q9NR30 783 aaKnown RBP eCLIP11.37□□□□□ -0.59
VRK1-206ENST00000557222 TSPYL4Q9UJ04 414 aa11.37□□□□□ -0.59
VRK1-206ENST00000557222 DNAJB2P25686 324 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 SCNN1DP51172 638 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 MAP1SQ66K74 1059 aaPredicted RBP11.36□□□□□ -0.59
VRK1-206ENST00000557222 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 NIM1KQ8IY84 436 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 GJA3Q9Y6H8 435 aa11.36□□□□□ -0.59
VRK1-206ENST00000557222 FECHP22830 423 aa11.35□□□□□ -0.59
VRK1-206ENST00000557222 RALBP1Q15311 655 aa11.35□□□□□ -0.59
VRK1-206ENST00000557222 THUMPD2Q9BTF0 503 aaKnown RBP11.35□□□□□ -0.59
VRK1-206ENST00000557222 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
VRK1-206ENST00000557222 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
VRK1-206ENST00000557222 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 PPIP5K2O43314 1243 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 EPS15P42566 896 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 ECE1P42892 770 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 RIPK4P57078 832 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 KCNC4Q03721 635 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 SP8Q8IXZ3 490 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 ADARB2Q9NS39 739 aaKnown RBP11.34□□□□□ -0.59
VRK1-206ENST00000557222 ZNRF3Q9ULT6 936 aa11.34□□□□□ -0.59
VRK1-206ENST00000557222 EIF2S2P20042 333 aaKnown RBP11.33□□□□□ -0.6
VRK1-206ENST00000557222 TMPOP42166 694 aaKnown RBP11.33□□□□□ -0.6
VRK1-206ENST00000557222 TCIRG1Q13488 830 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
VRK1-206ENST00000557222 TMEM134Q9H6X4 195 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.6
VRK1-206ENST00000557222 COL4A5P29400 1685 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 ABCC4O15439 1325 aa11.33□□□□□ -0.6
VRK1-206ENST00000557222 OATP04181 439 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 CXCL9Q07325 125 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 KIAA2012Q0VF49 1180 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 TNIP1Q15025 636 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 DPP8Q6V1X1 898 aaPredicted RBP11.32□□□□□ -0.6
VRK1-206ENST00000557222 DDX46Q7L014 1031 aaKnown RBP11.32□□□□□ -0.6
VRK1-206ENST00000557222 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 NLRP10Q86W26 655 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 GPIHBP1Q8IV16 184 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 MPNDQ8N594 471 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
VRK1-206ENST00000557222 CHL1O00533 1208 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 HOXB7P09629 217 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 HSPA8P11142 646 aaKnown RBP11.31□□□□□ -0.6
VRK1-206ENST00000557222 MAP2K2P36507 400 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 LBX1P52954 281 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 GRAPQ13588 217 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 AOC3Q16853 763 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 GRAPLQ8TC17 118 aaPredicted RBP11.31□□□□□ -0.6
VRK1-206ENST00000557222 PXYLP1Q8TE99 480 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 TLL2Q9Y6L7 1015 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
VRK1-206ENST00000557222 LTBP1Q14766 1721 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 TCERG1O14776 1098 aaKnown RBP11.3□□□□□ -0.6
VRK1-206ENST00000557222 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 TJAP1Q5JTD0 557 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 CST9Q5W186 159 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 CIAPIN1Q6FI81 312 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 XAGE3Q8WTP9 111 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 BEGAINQ9BUH8 593 aa11.3□□□□□ -0.6
VRK1-206ENST00000557222 TRMT112Q9UI30 125 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms