RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CHRNDQ07001 517 aa17.64■□□□□ 0.41
SLIRP-207ENST00000556831 ANKRD44Q8N8A2 993 aa17.64■□□□□ 0.41
SLIRP-207ENST00000556831 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
SLIRP-207ENST00000556831 ZNF804BA4D1E1 1349 aa17.64■□□□□ 0.41
SLIRP-207ENST00000556831 PSMD14O00487 310 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 GNAI3P08754 354 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 TRIM27P14373 513 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
SLIRP-207ENST00000556831 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
SLIRP-207ENST00000556831 PLIN1O60240 522 aa17.62■□□□□ 0.41
SLIRP-207ENST00000556831 TAF5LO75529 589 aa17.62■□□□□ 0.41
SLIRP-207ENST00000556831 MAP1SQ66K74 1059 aaPredicted RBP17.62■□□□□ 0.41
SLIRP-207ENST00000556831 INTS3Q68E01 1043 aaKnown RBP17.62■□□□□ 0.41
SLIRP-207ENST00000556831 PUS3Q9BZE2 481 aaKnown RBP17.62■□□□□ 0.41
SLIRP-207ENST00000556831 GPRC5DQ9NZD1 345 aa17.62■□□□□ 0.41
SLIRP-207ENST00000556831 PSME4Q14997 1843 aa17.61■□□□□ 0.41
SLIRP-207ENST00000556831 EGFRP00533 1210 aa17.61■□□□□ 0.41
SLIRP-207ENST00000556831 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
SLIRP-207ENST00000556831 FBXW7Q969H0 707 aa17.61■□□□□ 0.41
SLIRP-207ENST00000556831 H7C1D1 291 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 RPS12P25398 132 aaKnown RBP17.6■□□□□ 0.41
SLIRP-207ENST00000556831 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
SLIRP-207ENST00000556831 PODNQ7Z5L7 613 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 KLHDC4Q8TBB5 520 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 MXD3Q9BW11 206 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 COA1Q9GZY4 146 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 ADARB2Q9NS39 739 aaKnown RBP17.6■□□□□ 0.41
SLIRP-207ENST00000556831 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
SLIRP-207ENST00000556831 MROH5Q6ZUA9 1318 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 IRS2Q9Y4H2 1338 aa17.6■□□□□ 0.41
SLIRP-207ENST00000556831 ITGBL1O95965 494 aaPredicted RBP17.59■□□□□ 0.41
SLIRP-207ENST00000556831 MS4A1P11836 297 aa17.59■□□□□ 0.41
SLIRP-207ENST00000556831 METTL24Q5JXM2 366 aa17.59■□□□□ 0.41
SLIRP-207ENST00000556831 USP50Q70EL3 339 aaPredicted RBP17.59■□□□□ 0.41
SLIRP-207ENST00000556831 ZNF804AQ7Z570 1209 aa17.59■□□□□ 0.41
SLIRP-207ENST00000556831 MEIS3Q99687 375 aa17.59■□□□□ 0.41
SLIRP-207ENST00000556831 PASKQ96RG2 1323 aa17.58■□□□□ 0.4
SLIRP-207ENST00000556831 LBX1P52954 281 aa17.58■□□□□ 0.4
SLIRP-207ENST00000556831 DLK2Q6UY11 383 aa17.58■□□□□ 0.4
SLIRP-207ENST00000556831 DZIP1LQ8IYY4 767 aaKnown RBP17.58■□□□□ 0.4
SLIRP-207ENST00000556831 CREBZFQ9NS37 354 aa17.58■□□□□ 0.4
SLIRP-207ENST00000556831 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 SAMD7Q7Z3H4 446 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 ITPRIPQ8IWB1 547 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 MICALL2Q8IY33 904 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 DPF2Q92785 391 aa17.57■□□□□ 0.4
SLIRP-207ENST00000556831 CNOT7Q9UIV1 285 aaKnown RBP17.57■□□□□ 0.4
SLIRP-207ENST00000556831 GNAI2P04899 355 aa17.56■□□□□ 0.4
SLIRP-207ENST00000556831 LRRC24Q50LG9 513 aa17.56■□□□□ 0.4
SLIRP-207ENST00000556831 PRPF38BQ5VTL8 546 aaKnown RBP17.56■□□□□ 0.4
SLIRP-207ENST00000556831 TMEM57Q8N5G2 664 aa17.56■□□□□ 0.4
SLIRP-207ENST00000556831 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
SLIRP-207ENST00000556831 ASTN2O75129 1339 aaPredicted RBP17.55■□□□□ 0.4
SLIRP-207ENST00000556831 TRAF5O00463 557 aa17.55■□□□□ 0.4
SLIRP-207ENST00000556831 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
SLIRP-207ENST00000556831 RSBN1LQ6PCB5 846 aaPredicted RBP17.55■□□□□ 0.4
SLIRP-207ENST00000556831 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
SLIRP-207ENST00000556831 CNTROBQ8N137 903 aa17.55■□□□□ 0.4
SLIRP-207ENST00000556831 RCAN3Q9UKA8 241 aa17.55■□□□□ 0.4
SLIRP-207ENST00000556831 MYO3BQ8WXR4 1341 aa17.54■□□□□ 0.4
SLIRP-207ENST00000556831 VIL1P09327 827 aaKnown RBP17.54■□□□□ 0.4
SLIRP-207ENST00000556831 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
SLIRP-207ENST00000556831 TBC1D10BQ4KMP7 808 aaPredicted RBP17.54■□□□□ 0.4
SLIRP-207ENST00000556831 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.54■□□□□ 0.4
SLIRP-207ENST00000556831 AGBL3Q8NEM8 1001 aa17.54■□□□□ 0.4
SLIRP-207ENST00000556831 EYA2O00167 538 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 SRGAP3O43295 1099 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 CAVIN4Q5BKX8 364 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 RBM26Q5T8P6 1007 aaKnown RBP17.53■□□□□ 0.4
SLIRP-207ENST00000556831 STRIP1Q5VSL9 837 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 C15orf52Q6ZUT6 534 aaKnown RBP17.53■□□□□ 0.4
SLIRP-207ENST00000556831 OGFOD1Q8N543 542 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 SIL1Q9H173 461 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 MKRN1Q9UHC7 482 aaKnown RBP17.53■□□□□ 0.4
SLIRP-207ENST00000556831 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 JAG2Q9Y219 1238 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
SLIRP-207ENST00000556831 FRAT2O75474 233 aaPredicted RBP17.52■□□□□ 0.4
SLIRP-207ENST00000556831 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
SLIRP-207ENST00000556831 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
SLIRP-207ENST00000556831 GMLQ99445 158 aa17.52■□□□□ 0.4
SLIRP-207ENST00000556831 GLIS2Q9BZE0 524 aaPredicted RBP17.52■□□□□ 0.4
SLIRP-207ENST00000556831 CD209Q9NNX6 404 aa17.52■□□□□ 0.4
SLIRP-207ENST00000556831 WBP1LQ9NX94 342 aa17.52■□□□□ 0.4
SLIRP-207ENST00000556831 POLR2AP24928 1970 aaKnown RBP17.51■□□□□ 0.39
SLIRP-207ENST00000556831 ZNF609O15014 1411 aa17.51■□□□□ 0.39
SLIRP-207ENST00000556831 PDE8BO95263 885 aa17.51■□□□□ 0.39
SLIRP-207ENST00000556831 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
SLIRP-207ENST00000556831 USP17L8P0C7I0 530 aa17.51■□□□□ 0.39
SLIRP-207ENST00000556831 GTF2IP78347 998 aa17.51■□□□□ 0.39
SLIRP-207ENST00000556831 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
SLIRP-207ENST00000556831 TTLL5Q6EMB2 1281 aa17.51■□□□□ 0.39
SLIRP-207ENST00000556831 CIAO1O76071 339 aa17.5■□□□□ 0.39
SLIRP-207ENST00000556831 RLBP1P12271 317 aa17.5■□□□□ 0.39
SLIRP-207ENST00000556831 SLC5A1P13866 664 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms