RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 RCOR1Q9UKL0 485 aa9.98□□□□□ -0.81
MARK3-210ENST00000556463 NCAPD2Q15021 1401 aa9.98□□□□□ -0.81
MARK3-210ENST00000556463 DIP2BQ9P265 1576 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 NEDD4P46934 1319 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 KIF2AO00139 706 aaPredicted RBP9.97□□□□□ -0.81
MARK3-210ENST00000556463 LEKR1Q6ZMV7 388 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 GEMIN8Q9NWZ8 242 aaKnown RBP9.97□□□□□ -0.81
MARK3-210ENST00000556463 CTAGE5O15320 804 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 PTPN14Q15678 1187 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 ZSCAN26Q16670 478 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 NCAPGQ9BPX3 1015 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 CEP83Q9Y592 693 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 TAF6LQ9Y6J9 622 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 COL15A1P39059 1388 aa9.97□□□□□ -0.81
MARK3-210ENST00000556463 SLU7O95391 586 aaKnown RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 TUBB4AP04350 444 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 SKILP12757 684 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 NUBP1P53384 320 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 E4F1Q66K89 784 aaPredicted RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 BPIFA3Q9BQP9 254 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 IMPACTQ9P2X3 320 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 HEG1Q9ULI3 1381 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 DDX60Q8IY21 1712 aaKnown RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 GOLGA6L4A6NEF3 574 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 HIP1O00291 1037 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 ZKSCAN1P17029 563 aaPredicted RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 LCMT1Q9UIC8 334 aa9.96□□□□□ -0.81
MARK3-210ENST00000556463 SIPA1L3O60292 1781 aaPredicted RBP9.96□□□□□ -0.81
MARK3-210ENST00000556463 PHRF1Q9P1Y6 1649 aaKnown RBP9.96□□□□□ -0.82
MARK3-210ENST00000556463 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
MARK3-210ENST00000556463 BIRC2Q13490 618 aa9.96□□□□□ -0.82
MARK3-210ENST00000556463 BMS1Q14692 1282 aaKnown RBP9.96□□□□□ -0.82
MARK3-210ENST00000556463 FERMT3Q86UX7 667 aa9.96□□□□□ -0.82
MARK3-210ENST00000556463 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
MARK3-210ENST00000556463 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.96□□□□□ -0.82
MARK3-210ENST00000556463 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 CCDC172P0C7W6 258 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 TPM4P67936 248 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 STX1AQ16623 288 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 TFIP11Q9UBB9 837 aaKnown RBP9.95□□□□□ -0.82
MARK3-210ENST00000556463 ADAMTS7Q9UKP4 1686 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 LMTK3Q96Q04 1460 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 RFX7Q2KHR2 1363 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 PSEN1P49768 467 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 EIF4A1P60842 406 aaKnown RBP9.95□□□□□ -0.82
MARK3-210ENST00000556463 FAM227BQ96M60 508 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 GOLPH3LQ9H4A5 285 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 RGPD8O14715 1765 aaPredicted RBP9.95□□□□□ -0.82
MARK3-210ENST00000556463 SALL1Q9NSC2 1324 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
MARK3-210ENST00000556463 ATL3Q6DD88 541 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 MNS1Q8NEH6 495 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 DNAAF4Q8WXU2 420 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 PLEKHA4Q9H4M7 779 aa9.95□□□□□ -0.82
MARK3-210ENST00000556463 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.95□□□□□ -0.82
MARK3-210ENST00000556463 A0A1B0GUL7 405 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 ALDH1L1O75891 902 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 GSDMDP57764 484 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 TMCO3Q6UWJ1 677 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 ANKRD20A12PQ8NF67 263 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 A0A0D9SFI3 127 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 ERC1Q8IUD2 1116 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 CLASRPQ8N2M8 674 aaKnown RBP9.94□□□□□ -0.82
MARK3-210ENST00000556463 KAZALD1Q96I82 304 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 LLPHQ9BRT6 129 aaKnown RBP9.94□□□□□ -0.82
MARK3-210ENST00000556463 AGXT2Q9BYV1 514 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 SASH1O94885 1247 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 HDGFL1Q5TGJ6 251 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 NAA16Q6N069 864 aaPredicted RBP9.94□□□□□ -0.82
MARK3-210ENST00000556463 BLOC1S2Q6QNY1 142 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 CFAP45Q9UL16 551 aa9.94□□□□□ -0.82
MARK3-210ENST00000556463 TAF5LO75529 589 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 MAP2K2P36507 400 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ERCC6LQ2NKX8 1250 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 LRCH2Q5VUJ6 765 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 LRRN4CLQ8ND94 238 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 FANCGO15287 622 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 CLCN6P51797 869 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ARMCX5Q6P1M9 558 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
MARK3-210ENST00000556463 RPAINQ86UA6 219 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 PPP1R13BQ96KQ4 1090 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 CALR3Q96L12 384 aaKnown RBP9.93□□□□□ -0.82
MARK3-210ENST00000556463 SUFUQ9UMX1 484 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 A6NJR5 290 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ATP8B1O43520 1251 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ST5P78524 1137 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 CCDC91Q7Z6B0 441 aa9.93□□□□□ -0.82
MARK3-210ENST00000556463 ARGLU1Q9NWB6 273 aaPredicted RBP9.93□□□□□ -0.82
MARK3-210ENST00000556463 RRP15Q9Y3B9 282 aaKnown RBP9.93□□□□□ -0.82
MARK3-210ENST00000556463 OVOS2A0A0G2JMS6 1433 aa9.92□□□□□ -0.82
MARK3-210ENST00000556463 JAK2O60674 1132 aa9.92□□□□□ -0.82
MARK3-210ENST00000556463 PHACTR2O75167 634 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms